RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MRM1Q6IN84 353 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 C10orf111Q8N326 155 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 ZNF655Q8N720 491 aaPredicted RBP13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 AMER3Q8N944 861 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 OR8K5Q8NH50 307 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 OR5P2Q8WZ92 322 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 NCLNQ969V3 563 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 MACROD1Q9BQ69 325 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 SLC35A5Q9BS91 424 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 YY1AP1Q9H869 796 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 LYARQ9NX58 379 aaKnown RBP13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 TEX10Q9NXF1 929 aaPredicted RBP13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 LRIT1Q9P2V4 623 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 SCN3AQ9NY46 2000 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 FREM2Q5SZK8 3169 aa13.81□□□□□ -0.2
POLR2J3-204ENST00000486319 A0A0J9YVX5 310 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 TMEM8BA6NDV4 472 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 LILRA5A6NI73 299 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 C4orf51C9J302 202 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 PPM1DO15297 605 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 NUDT21O43809 227 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 CTSVO60911 334 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 KRT75O95678 551 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 STATHP02808 62 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RAP2AP10114 183 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 BMP2P12643 396 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 IL1RNP18510 177 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ZNF10P21506 573 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 UQCRC2P22695 453 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 FRKP42685 505 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 MAZP56270 477 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 CHRNB3Q05901 458 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 VEZF1Q14119 521 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 MLC1Q15049 377 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RGNQ15493 299 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 PRSS53Q2L4Q9 553 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 MANEAQ5SRI9 462 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 SWT1Q5T5J6 900 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 NDUFAF5Q5TEU4 345 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RNF44Q7L0R7 432 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ZNF551Q7Z340 670 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 C17orf82Q86X59 251 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ZZZ3Q8IYH5 903 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 MMP21Q8N119 569 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 EID3Q8N140 333 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ANKFN1Q8N957 763 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 KDF1Q8NAX2 398 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ICA1LQ8NDH6 482 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 OR52N2Q8NGI0 321 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RSC1A1Q92681 617 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RERGQ96A58 199 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 EME1Q96AY2 570 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ZBED6CLQ96FA7 236 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 DEPDC7Q96QD5 511 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 SEPHS2Q99611 448 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 SEMA6CQ9H3T2 930 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 SYNDIG1Q9H7V2 258 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 SYNPO2LQ9H987 977 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 NEUROD4Q9HD90 331 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 AGPAT4Q9NRZ5 378 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ACSS1Q9NUB1 689 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 DCAF13Q9NV06 445 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 OLAHQ9NV23 265 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 POMT2Q9UKY4 750 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 LRCH1Q9Y2L9 728 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ASB4Q9Y574 426 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 AKAP13Q12802 2813 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ZSCAN9O15535 394 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 UBXN7O94888 489 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 PNLIPP16233 465 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 TYRP1P17643 537 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 MANFP55145 182 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 PCBP4P57723 403 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RAB8AP61006 207 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 VAC14Q08AM6 782 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 FADDQ13158 208 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ST3GAL2Q16842 350 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 SFT2D3Q587I9 215 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 HMBOX1Q6NT76 420 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ANGPTL8Q6UXH0 198 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RBM44Q6ZP01 1051 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ZNF761Q86XN6 746 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 Q8N9G6 341 aaPredicted RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 KCT2Q8NC54 265 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 PNPT1Q8TCS8 783 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 UTP15Q8TED0 518 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RNF145Q96MT1 663 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 ZNF570Q96NI8 536 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 FCRL4Q96PJ5 515 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 SLC38A3Q99624 504 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 NLNQ9BYT8 704 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 SEMA6AQ9H2E6 1030 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 CCDC86Q9H6F5 360 aaKnown RBP13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RNF215Q9Y6U7 377 aa13.8□□□□□ -0.2
POLR2J3-204ENST00000486319 RHPN2P1A8MT19 583 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 H0YJX3 145 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 CSO75390 466 aaKnown RBP13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 NTRK1P04629 796 aa13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 ZNF888P0CJ79 500 aaPredicted RBP13.79□□□□□ -0.2
POLR2J3-204ENST00000486319 SMIM10L1P0DMW3 83 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms