RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 FAM3CQ92520 227 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 TCEAL4Q96EI5 215 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 ZNF486Q96H40 463 aaPredicted RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 PANK2Q9BZ23 570 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 PDE7BQ9NP56 450 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 MRPL17Q9NRX2 175 aaKnown RBP3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 NUDT4Q9NZJ9 180 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 MAD2L2Q9UI95 211 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 MAN1B1Q9UKM7 699 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 PCDHGB4Q9UN71 923 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 CSAG2Q9Y5P2 127 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 LRBAP50851 2863 aa3.83□□□□□ -1.8
SMARCC1-207ENST00000485833 CABIN1Q9Y6J0 2220 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 TSC2P49815 1807 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 IGKV6D-21A0A0A0MT36 114 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 A0A1W2PR80 420 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 TMEM150BA6NC51 233 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 J3QKU1 62 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 ZBTB5O15062 677 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 IGHV2-70P01814 119 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 CSRP1P21291 193 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 BCKDHBP21953 392 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 HNRNPKP61978 463 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 ELAVL2Q12926 359 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 CALCOCO2Q13137 446 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 NFATC2Q13469 925 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 RAPSNQ13702 412 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 GIT2Q14161 759 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 FAM78AQ5JUQ0 283 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 UGT3A1Q6NUS8 523 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 SUSD1Q6UWL2 747 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 DNAAF5Q86Y56 855 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 MMD2Q8IY49 270 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 NME8Q8N427 588 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 THAP8Q8NA92 274 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 CFAP61Q8NHU2 1237 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 PTERQ96BW5 349 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 NXNL1Q96CM4 212 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 MBOAT7Q96N66 472 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 LRRC3BQ96PB8 259 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 MRPL9Q9BYD2 267 aaKnown RBP3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 NACAP1Q9BZK3 213 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 CXCL16Q9H2A7 254 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 GDE1Q9NZC3 331 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 FBXO2Q9UK22 296 aaPredicted RBP3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 TMED3Q9Y3Q3 217 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 UBIAD1Q9Y5Z9 338 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 NBASA2RRP1 2371 aa3.82□□□□□ -1.8
SMARCC1-207ENST00000485833 CENPEQ02224 2701 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 SETD2Q9BYW2 2564 aaPredicted RBP3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 TLN1Q9Y490 2541 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 KNL1Q8NG31 2342 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 IGHV3OR16-10A0A075B7F0 116 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 BCLAF3A2AJT9 711 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 NEMP2A6NFY4 417 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 MPTX1A8MV57 137 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 EPM2AB3EWF7 344 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 ARPC2O15144 300 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 IDH3BO43837 385 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 ECI2O75521 394 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 LINGO3P0C6S8 592 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 CCDC192P0DO97 292 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 PFKFB1P16118 471 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 PRKACGP22612 351 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 MPZP25189 248 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 GDI1P31150 447 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 GPC3P51654 580 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 ZNF75DP51815 510 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 MS4A2Q01362 244 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 PON2Q15165 354 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 UGCGQ16739 394 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 PRR27Q6MZM9 219 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 MFSD12Q6NUT3 480 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 NUP54Q7Z3B4 507 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 METTL13Q8N6R0 699 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 APOBEC4Q8WW27 367 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 ATL1Q8WXF7 558 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 THOC1Q96FV9 657 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 MTMR12Q9C0I1 747 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 CHST11Q9NPF2 352 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 TMEM9BQ9NQ34 198 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 TEX10Q9NXF1 929 aaPredicted RBP3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 NSMCE4AQ9NXX6 385 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 C19orf25Q9UFG5 118 aaPredicted RBP3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 PPIEQ9UNP9 301 aaKnown RBP3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 POLQO75417 2590 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 ARID2Q68CP9 1835 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 AHCTF1Q8WYP5 2266 aa3.81□□□□□ -1.8
SMARCC1-207ENST00000485833 CEP192Q8TEP8 1941 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 SPTBN1Q01082 2364 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 FAM149AA5PLN7 773 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 O00370 1275 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 STAM2O75886 525 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 TRUB2O95900 331 aaKnown RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 ZFYP08048 801 aaPredicted RBP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 RAB40ALP0C0E4 278 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 U2AF2P26368 475 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 HLA-FP30511 346 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 CCR10P46092 362 aa3.8□□□□□ -1.8
SMARCC1-207ENST00000485833 OR1G1P47890 313 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms