RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 SLCO3A1Q9UIG8 710 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 RUVBL1Q9Y265 456 aaKnown RBP7.38□□□□□ -1.23
SNX13-208ENST00000482558 RNF11Q9Y3C5 154 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 ASB1Q9Y576 335 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 GMEB1Q9Y692 573 aa7.38□□□□□ -1.23
SNX13-208ENST00000482558 KCNE1BA0A087WTH5 132 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ELOVL7A1L3X0 281 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ZC3H12DA2A288 527 aaKnown RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 PRAMEF25A6NGN4 478 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ENO4A6NNW6 628 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 HIDE1A8MVS5 230 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 A8MXE2 369 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ZNF701M0R085 212 aaPredicted RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 CLOCKO15516 846 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 VEGFDO43915 354 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 PIAS2O75928 621 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 PRSS23O95084 383 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 PCDH8O95206 1070 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 CCNDBP1O95273 360 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SNRNP70P08621 437 aaKnown RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 CISD3P0C7P0 127 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 BCKDHAP12694 445 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 GJA1P17302 382 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 EGR1P18146 543 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 MALP21145 153 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 PAX7P23759 505 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ITGB8P26012 769 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 HSD17B2P37059 387 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 MMP12P39900 470 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 HTR6P50406 440 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ATXN3P54252 364 aaPredicted RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 ESRRGP62508 458 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 RPP30P78346 268 aaKnown RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 PHEXP78562 749 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ROR2Q01974 943 aaKnown RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 IRF8Q02556 426 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 DPTQ07507 201 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ABHD18Q0P651 414 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 MERTKQ12866 999 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 RAB32Q13637 225 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 APOFQ13790 326 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 E2F2Q14209 437 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 PDGFRLQ15198 375 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 PTPRRQ15256 657 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 HIST2H2ACQ16777 129 aaPredicted RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 ZXDCQ2QGD7 858 aaPredicted RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 PTCHD3Q3KNS1 767 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 FAM174BQ3ZCQ3 159 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SPIN4Q56A73 249 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 RUNDC3AQ59EK9 446 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 FBXO48Q5FWF7 155 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 RABL3Q5HYI8 236 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 EMC4Q5J8M3 183 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 PAGE2BQ5JRK9 111 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 C6orf52Q5T4I8 152 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ANXA8L1Q5VT79 327 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 HIST2H2AA3Q6FI13 130 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 GRHL2Q6ISB3 625 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SLC2A7Q6PXP3 512 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SCIMPQ6UWF3 145 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 UNQ6494/PRO21346Q6UXR6 183 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 IKBIPQ70UQ0 350 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 LPCAT2Q7L5N7 544 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 RAB11FIP2Q7L804 512 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 KANSL1Q7Z3B3 1105 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 TMCO2Q7Z6W1 182 aaPredicted RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 GPR180Q86V85 440 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 KRT73Q86Y46 540 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 LURAP1LQ8IV03 231 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ADHFE1Q8IWW8 467 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SLC22A15Q8IZD6 547 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 DHRSXQ8N5I4 330 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 C10orf53Q8N6V4 93 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 TRIML2Q8N7C3 387 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 TSPAN14Q8NG11 270 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 BPIFB1Q8TDL5 484 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 RSC1A1Q92681 617 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 PTP4A1Q93096 173 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 AP2M1Q96CW1 435 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 REXO5Q96IC2 774 aaKnown RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 MRGPRX4Q96LA9 322 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 LINC00615Q96LM1 132 aaPredicted RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 TEX37Q96LM6 180 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 CIB1Q99828 191 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 THUMPD3Q9BV44 507 aaKnown RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 CHID1Q9BWS9 393 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 TRIM4Q9C037 500 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 CHST8Q9H2A9 424 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SEMA6AQ9H2E6 1030 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 EHD1Q9H4M9 534 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 ACTL8Q9H568 366 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 CHODLQ9H9P2 273 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SMURF2Q9HAU4 748 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 SLC35C2Q9NQQ7 365 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 G6PC2Q9NQR9 355 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 DYRK4Q9NR20 520 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 HCFC1R1Q9NWW0 138 aa7.37□□□□□ -1.23
SNX13-208ENST00000482558 FAM120CQ9NX05 1096 aaKnown RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 SMPD3Q9NY59 655 aaPredicted RBP7.37□□□□□ -1.23
SNX13-208ENST00000482558 VPS29Q9UBQ0 182 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms