RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 MDH1P40925 334 aaKnown RBP13.6□□□□□ -0.23
USP11-207ENST00000478596 TOR1AIP1Q5JTV8 583 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 FRG2Q64ET8 278 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 FRMPD2BQ6IN97 320 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 MCATQ8IVS2 390 aaKnown RBP13.6□□□□□ -0.23
USP11-207ENST00000478596 EID3Q8N140 333 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 ZNF781Q8N8C0 355 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 TRPV3Q8NET8 790 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 SUN3Q8TAQ9 357 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 THAP11Q96EK4 314 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 FRG2BQ96QU4 278 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 HBEGFQ99075 208 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 LIME1Q9H400 295 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 COPS7BQ9H9Q2 264 aaPredicted RBP13.6□□□□□ -0.23
USP11-207ENST00000478596 ZNF160Q9HCG1 818 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 PFDN4Q9NQP4 134 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 ZFP69BQ9UJL9 534 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 NXT1Q9UKK6 140 aaKnown RBP13.6□□□□□ -0.23
USP11-207ENST00000478596 ZNF490Q9ULM2 529 aaPredicted RBP13.6□□□□□ -0.23
USP11-207ENST00000478596 EDARQ9UNE0 448 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 TIMM22Q9Y584 194 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 KLK4Q9Y5K2 254 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 MXRA5Q9NR99 2828 aa13.6□□□□□ -0.23
USP11-207ENST00000478596 TMEM233B4DJY2 109 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 H0YGG7 62 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 MANBAO00462 879 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 TXNDC9O14530 226 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 KLF11O14901 512 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 PRAMEF4O60810 478 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 ULK1O75385 1050 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 WFS1O76024 890 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 WDPCPO95876 746 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 PRR35P0CG20 571 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 AHRP35869 848 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 CASP2P42575 452 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 GCGRP47871 477 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 SCTRP47872 440 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 GYS2P54840 703 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 ARF3P61204 181 aaPredicted RBP13.59□□□□□ -0.23
USP11-207ENST00000478596 STXBP1P61764 594 aaKnown RBP13.59□□□□□ -0.23
USP11-207ENST00000478596 GNGT1P63211 74 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 PMP22Q01453 160 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 GALNT1Q10472 559 aaPredicted RBP13.59□□□□□ -0.23
USP11-207ENST00000478596 TCTE1Q5JU00 501 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 TCHHL1Q5QJ38 904 aaPredicted RBP13.59□□□□□ -0.23
USP11-207ENST00000478596 PRAMEF9Q5VWM5 478 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 SCIMPQ6UWF3 145 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 CAMKMTQ7Z624 323 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 DOLPP1Q86YN1 238 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 DNAJC22Q8N4W6 341 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 WFDC11Q8NEX6 87 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 OR7G3Q8NG95 312 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 OR4K1Q8NGD4 311 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 HUS1BQ8NHY5 278 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 BRIX1Q8TDN6 353 aaKnown RBP13.59□□□□□ -0.23
USP11-207ENST00000478596 TWIST2Q8WVJ9 160 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 SLC13A3Q8WWT9 602 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 FAR2Q96K12 515 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 PPP1R36Q96LQ0 422 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 ZNF395Q9H8N7 513 aaPredicted RBP13.59□□□□□ -0.23
USP11-207ENST00000478596 ADGRE2Q9UHX3 823 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 PPT2Q9UMR5 302 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 TRAF6Q9Y4K3 522 aa13.59□□□□□ -0.23
USP11-207ENST00000478596 AKAP6Q13023 2319 aa13.58□□□□□ -0.23
USP11-207ENST00000478596 SCN3AQ9NY46 2000 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 KCNE1BA0A087WTH5 132 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 LOC105369274A0A096LPK9 316 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 LOC102723532A0A0G2JNH3 316 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 URADA6NGE7 173 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 H0YIV9 168 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 SNNO75324 88 aaPredicted RBP13.58□□□□□ -0.24
USP11-207ENST00000478596 CTAG2O75638 210 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 F10P00742 488 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 CTSBP07858 339 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 PIM1P11309 404 aaPredicted RBP13.58□□□□□ -0.24
USP11-207ENST00000478596 SERPINB3P29508 390 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 HTR6P50406 440 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 RPL14P50914 215 aaKnown RBP13.58□□□□□ -0.24
USP11-207ENST00000478596 NEK2P51955 445 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 FOXA1P55317 472 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 TGM3Q08188 693 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 MYBPHQ13203 477 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 GRM7Q14831 915 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 NDUFA9Q16795 377 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 WASHC2DQ5SRD0 308 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 C10orf62Q5T681 223 aaPredicted RBP13.58□□□□□ -0.24
USP11-207ENST00000478596 KANK2Q63ZY3 851 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 ADNP2Q6IQ32 1131 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 HOMEZQ8IX15 550 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 LAS2Q8IYD9 372 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 CLYBLQ8N0X4 340 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 OR4N4Q8N0Y3 316 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 ANKRD53Q8N9V6 530 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 LILRB4Q8NHJ6 448 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 SORT1Q99523 831 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 NSRP1Q9H0G5 558 aaKnown RBP13.58□□□□□ -0.24
USP11-207ENST00000478596 NT5DC2Q9H857 520 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 SLCO1B3Q9NPD5 702 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 DMRT3Q9NQL9 472 aa13.58□□□□□ -0.24
USP11-207ENST00000478596 NMRK1Q9NWW6 199 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms