RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 C2orf15Q8WU43 125 aaKnown RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 FAM222BQ8WU58 562 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ZNF606Q8WXB4 792 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ARNTL2Q8WYA1 636 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 LPGAT1Q92604 370 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 MTERF3Q96E29 417 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 GMPPAQ96IJ6 420 aaPredicted RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 PRAC1Q96KF2 57 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 B3GALT6Q96L58 329 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CCDC42Q96M95 316 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CDRT15Q96T59 188 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 BAG1Q99933 345 aaPredicted RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 AGPAT1Q99943 283 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ACBD6Q9BR61 282 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ABHD6Q9BV23 337 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ELOVL4Q9GZR5 314 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 ZBP1Q9H171 429 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 HAUS4Q9H6D7 363 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 FAM49BQ9NUQ9 324 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 AIPL1Q9NZN9 384 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CRNNQ9UBG3 495 aaPredicted RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 MTRRQ9UBK8 725 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 HMGXB4Q9UGU5 601 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 CHORDC1Q9UHD1 332 aaPredicted RBP3.57□□□□□ -1.84
UBR3-209ENST00000477461 GTF3C4Q9UKN8 822 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 TSPAN16Q9UKR8 245 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 TTLL3Q9Y4R7 772 aa3.57□□□□□ -1.84
UBR3-209ENST00000477461 MTCL1Q9Y4B5 1905 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 PRSS51A0A1B0GVH4 220 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 MEIOCA2RUB1 952 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 MYBPHLA2RUH7 354 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 TMCO5BA8MYB1 307 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 O00370 1275 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 PRRG1O14668 218 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 HCRTO43612 131 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 RTN2O75298 545 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 TRMUO75648 421 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 LSM8O95777 96 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 CALCAP01258 141 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 CALB1P05937 261 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 PLEKP08567 350 aaPredicted RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 OR4Q2P0C623 313 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 GZMAP12544 262 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 GJA1P17302 382 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 DESP17661 470 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 AZU1P20160 251 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 IL11P20809 199 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 HNRNPH3P31942 346 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 NKX2-1P43699 371 aaPredicted RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 ACADSBP45954 432 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 NSFP46459 744 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 TUFMP49411 452 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 BMXP51813 675 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 THOP1P52888 689 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 SNRPD1P62314 119 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 RPL10AP62906 217 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 KRT83P78385 493 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 IFI35P80217 286 aaPredicted RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 ROR1Q01973 937 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 BST2Q10589 180 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 GPR17Q13304 367 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 PLD1Q13393 1074 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 PTPN14Q15678 1187 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 LRIT3Q3SXY7 679 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 IGSF11Q5DX21 431 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 XKR6Q5GH73 641 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 CCDC122Q5T0U0 273 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 ADAMTSL4-AS1Q5T5F5 129 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 LIN9Q5TKA1 542 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 TPGS2Q68CL5 300 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 SPINK14Q6IE38 97 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 C16orf54Q6UWD8 224 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 LCLAT1Q6UWP7 414 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 KIAA1328Q86T90 577 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 ERICH1Q86X53 443 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 LRRC8AQ8IWT6 810 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 CCDC170Q8IYT3 715 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 SIX6OS1Q8N1H7 587 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 ELMOD1Q8N336 334 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 C12orf29Q8N999 325 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 TSPAN14Q8NG11 270 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 OR2T12Q8NG77 320 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 OR10T2Q8NGX3 314 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 SPPL2BQ8TCT7 592 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 SLC2A14Q8TDB8 520 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 DAZLQ92904 295 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 MYLPFQ96A32 169 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 SMARCD1Q96GM5 515 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 PCED1BQ96HM7 432 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 KLHL5Q96PQ7 755 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 CHP1Q99653 195 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 HNRNPABQ99729 332 aaKnown RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 SYT11Q9BT88 431 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 DUSP16Q9BY84 665 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 GPR88Q9GZN0 384 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 MIS12Q9H081 205 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 DPEP3Q9H4B8 488 aa3.56□□□□□ -1.84
UBR3-209ENST00000477461 NHEJ1Q9H9Q4 299 aaPredicted RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 DMAP1Q9NPF5 467 aaPredicted RBP3.56□□□□□ -1.84
UBR3-209ENST00000477461 ACP6Q9NPH0 428 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms