RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 SUZ12Q15022 739 aaKnown RBP21.78■■□□□ 1.08
CCDC7-206ENST00000476558 MANEAQ5SRI9 462 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 SHQ1Q6PI26 577 aaKnown RBP21.78■■□□□ 1.08
CCDC7-206ENST00000476558 TMEM64Q6YI46 380 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 HIPK1Q86Z02 1210 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 UBALD2Q8IYN6 164 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 ST13P4Q8IZP2 240 aaPredicted RBP21.78■■□□□ 1.08
CCDC7-206ENST00000476558 ZFP28Q8NHY6 868 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 SDCCAG3Q96C92 435 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 C10orf90Q96M02 699 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 HSPA12BQ96MM6 686 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 ZNF681Q96N22 645 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 BBS4Q96RK4 519 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 SERINC2Q96SA4 455 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 SERHL2Q9H4I8 314 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 UCK1Q9HA47 277 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 SMURF2Q9HAU4 748 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 PNPLA3Q9NST1 481 aa21.78■■□□□ 1.08
CCDC7-206ENST00000476558 ABCA7Q8IZY2 2146 aa21.77■■□□□ 1.08
CCDC7-206ENST00000476558 URADA6NGE7 173 aa21.77■■□□□ 1.08
CCDC7-206ENST00000476558 hCG_2039718K7EN88 272 aa21.77■■□□□ 1.08
CCDC7-206ENST00000476558 TFPTP0C1Z6 253 aa21.77■■□□□ 1.08
CCDC7-206ENST00000476558 NCBP2P52298 156 aaKnown RBP eCLIP21.77■■□□□ 1.08
CCDC7-206ENST00000476558 RPS26P62854 115 aaKnown RBP21.77■■□□□ 1.08
CCDC7-206ENST00000476558 PPP1R8Q12972 351 aaKnown RBP21.77■■□□□ 1.08
CCDC7-206ENST00000476558 MAPK11Q15759 364 aa21.77■■□□□ 1.08
CCDC7-206ENST00000476558 C17orf82Q86X59 251 aaPredicted RBP21.77■■□□□ 1.08
CCDC7-206ENST00000476558 APLFQ8IW19 511 aaPredicted RBP21.77■■□□□ 1.08
CCDC7-206ENST00000476558 ARL14Q8N4G2 192 aa21.77■■□□□ 1.08
CCDC7-206ENST00000476558 DEFB123Q8N688 67 aa21.77■■□□□ 1.08
CCDC7-206ENST00000476558 RBM4BQ9BQ04 359 aaKnown RBP21.77■■□□□ 1.08
CCDC7-206ENST00000476558 RBM4Q9BWF3 364 aaKnown RBP21.77■■□□□ 1.08
CCDC7-206ENST00000476558 SCN3AQ9NY46 2000 aa21.77■■□□□ 1.07
CCDC7-206ENST00000476558 HMGN4O00479 90 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 ERAL1O75616 437 aaKnown RBP21.76■■□□□ 1.07
CCDC7-206ENST00000476558 THRBP10828 461 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 ITGA1P56199 1179 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 MAZP56270 477 aaKnown RBP21.76■■□□□ 1.07
CCDC7-206ENST00000476558 NXPH1P58417 271 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 SPDYE7PQ495Y7 208 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 REEP3Q6NUK4 255 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 SLC36A4Q6YBV0 504 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 GKN2Q86XP6 184 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 AVL9Q8NBF6 648 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 SLC38A5Q8WUX1 472 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 CYGBQ8WWM9 190 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 GABARAPL1Q9H0R8 117 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 IFT80Q9P2H3 777 aaPredicted RBP21.76■■□□□ 1.07
CCDC7-206ENST00000476558 ANGPT4Q9Y264 503 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 ZSCAN9O15535 394 aaPredicted RBP21.76■■□□□ 1.07
CCDC7-206ENST00000476558 BCKDHBP21953 392 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 MAGEA8P43361 318 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 CXCL12P48061 93 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 RUNX2Q13950 521 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 ZNF750Q32MQ0 723 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 TNFAIP8L2Q6P589 184 aaPredicted RBP21.76■■□□□ 1.07
CCDC7-206ENST00000476558 SFXN5Q8TD22 340 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 LMX1AQ8TE12 382 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 DNASE2BQ8WZ79 361 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 FBXL20Q96IG2 436 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 SEMA6CQ9H3T2 930 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 PRDM9Q9NQV7 894 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 U3KQV3 271 aa21.76■■□□□ 1.07
CCDC7-206ENST00000476558 A0A1W2PS29 197 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 E2F6O75461 281 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 OPN1SWP03999 348 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 NR2F6P10588 404 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 TYRP1P17643 537 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 CSNK2A2P19784 350 aaPredicted RBP21.75■■□□□ 1.07
CCDC7-206ENST00000476558 DEFB134Q4QY38 66 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 ANKRD34AQ69YU3 496 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 KRT80Q6KB66 452 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 ISLR2Q6UXK2 745 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 CEP68Q76N32 757 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 ABHD13Q7L211 337 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 PATL1Q86TB9 770 aaKnown RBP21.75■■□□□ 1.07
CCDC7-206ENST00000476558 CCDC116Q8IYX3 515 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 RERGQ96A58 199 aaPredicted RBP21.75■■□□□ 1.07
CCDC7-206ENST00000476558 NRBF2Q96F24 287 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 SPACA7Q96KW9 195 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 MIR1-1HGQ9H1L0 117 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 SOX17Q9H6I2 414 aaPredicted RBP21.75■■□□□ 1.07
CCDC7-206ENST00000476558 TMEFF2Q9UIK5 374 aaPredicted RBP21.75■■□□□ 1.07
CCDC7-206ENST00000476558 PHF11Q9UIL8 331 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 SIT1Q9Y3P8 196 aa21.75■■□□□ 1.07
CCDC7-206ENST00000476558 PRAMEF25A6NGN4 478 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 H3BNH8 94 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 STK25O00506 426 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 DIRAS1O95057 198 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 H6PDO95479 791 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 IFNA14P01570 189 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 ALBP02768 609 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 LINGO3P0C6S8 592 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 ALOX12P18054 663 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 PRKACGP22612 351 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 DNAJA1P31689 397 aaKnown RBP21.74■■□□□ 1.07
CCDC7-206ENST00000476558 LIM2P55344 173 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 TNFRSF17Q02223 184 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 TP53BP2Q13625 1128 aa21.74■■□□□ 1.07
CCDC7-206ENST00000476558 ZCCHC10Q8TBK6 192 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms