RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 UCK1Q9HA47 277 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 C8orf4Q9NR00 106 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 OLAHQ9NV23 265 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ERVK-11Q9UQG0 969 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 TMPRSS11DO60235 418 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 KRT75O95678 551 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 C6orf47O95873 294 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 FAM58BPP0C7Q3 252 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 SLC35G6P0C7Q6 338 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 RAP2AP10114 183 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 HBA1P69905 142 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 FKBP9P1Q75LS8 142 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 GPR155Q7Z3F1 870 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 ZNF438Q7Z4V0 828 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 NCLNQ969V3 563 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 GAL3ST3Q96A11 431 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 NUDT22Q9BRQ3 303 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 KLHL31Q9H511 634 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 PRDM7Q9NQW5 492 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 AGPAT4Q9NRZ5 378 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 DCAF13Q9NV06 445 aaKnown RBP16.55■□□□□ 0.24
HSPG2-208ENST00000471322 KLHL20Q9Y2M5 609 aa16.55■□□□□ 0.24
HSPG2-208ENST00000471322 A0A0J9YY10 115 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 PDPK1O15530 556 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 CSO75390 466 aaKnown RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 PNLIPP16233 465 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 EFNA1P20827 205 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 MAGP20916 626 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 ATP5A1P25705 553 aaKnown RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 CD1CP29017 333 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 ALDH9A1P49189 494 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 PDX1P52945 283 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 SLAMF1Q13291 335 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 VEZF1Q14119 521 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 MPEG1Q2M385 716 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 VMACQ2NL98 169 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 SFT2D3Q587I9 215 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 MANEAQ5SRI9 462 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 CDCP2Q5VXM1 449 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 RBM44Q6ZP01 1051 aaKnown RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 ACOT4Q8N9L9 421 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 CAMKVQ8NCB2 501 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 CIDECQ96AQ7 238 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 TM4SF19Q96DZ7 209 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 ZBED6CLQ96FA7 236 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 CHID1Q9BWS9 393 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 AICDAQ9GZX7 198 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 MAGIXQ9H6Y5 334 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 NEUROD4Q9HD90 331 aa16.54■□□□□ 0.24
HSPG2-208ENST00000471322 ACSS1Q9NUB1 689 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 LYARQ9NX58 379 aaKnown RBP16.54■□□□□ 0.24
HSPG2-208ENST00000471322 IGHV1OR21-1A0A087WYE8 117 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 OR5K3A6NET4 321 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 D6RAR5 112 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 NTN3O00634 580 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-208ENST00000471322 RPSAP08865 295 aaKnown RBP16.53■□□□□ 0.24
HSPG2-208ENST00000471322 TYRP1P17643 537 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 UQCRC2P22695 453 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 SHC2P98077 582 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 VAC14Q08AM6 782 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 FADDQ13158 208 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 MLC1Q15049 377 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 RGNQ15493 299 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 ATP6AP1Q15904 470 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 MRM1Q6IN84 353 aaKnown RBP16.53■□□□□ 0.24
HSPG2-208ENST00000471322 VN1R4Q7Z5H5 301 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 TRIM73Q86UV7 250 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 ZNF655Q8N720 491 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-208ENST00000471322 OR52N2Q8NGI0 321 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 AHCYL2Q96HN2 611 aaKnown RBP16.53■□□□□ 0.24
HSPG2-208ENST00000471322 RNF145Q96MT1 663 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 OR2A5Q96R48 311 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 SLC35A5Q9BS91 424 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 Q9H521 79 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 TMEM9Q9P0T7 183 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 PILRAQ9UKJ1 303 aa16.53■□□□□ 0.24
HSPG2-208ENST00000471322 LDLRP01130 860 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 HOXB3P14651 431 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-208ENST00000471322 ZNF10P21506 573 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-208ENST00000471322 CSF2RBP32927 897 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 FRKP42685 505 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-208ENST00000471322 GPR3P46089 330 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 AQP4P55087 323 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 MANFP55145 182 aaKnown RBP16.52■□□□□ 0.24
HSPG2-208ENST00000471322 CFHR1Q03591 330 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 RBBP4Q09028 425 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 GAB1Q13480 694 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 NR1D2Q14995 579 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 ISXQ2M1V0 245 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 NDUFAF5Q5TEU4 345 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 FCRL6Q6DN72 434 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 HMBOX1Q6NT76 420 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 TLDC1Q6P9B6 456 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 ZNF793Q6ZN11 406 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 AMIGO2Q86SJ2 522 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 ZZZ3Q8IYH5 903 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 PACRGLQ8N7B6 248 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 NCSTNQ92542 709 aa16.52■□□□□ 0.24
HSPG2-208ENST00000471322 RSC1A1Q92681 617 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms