RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 MCM10Q7L590 875 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 MIER3Q7Z3K6 550 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 CARM1Q86X55 608 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 TEX9Q8N6V9 391 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 C4orf32Q8N8J7 132 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 OR52E1Q8NGJ3 308 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 SAP25Q8TEE9 199 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 SSC4DQ8WTU2 575 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 DTD2Q96FN9 168 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 RBM24Q9BX46 236 aaKnown RBP3.11□□□□□ -1.91
BRCA2-202ENST00000470094 KRT23Q9C075 422 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 NAPBQ9H115 298 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 MAGEF1Q9HAY2 307 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 NINJ2Q9NZG7 142 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 EPS15L1Q9UBC2 864 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 HOOK1Q9UJC3 728 aaKnown RBP3.11□□□□□ -1.91
BRCA2-202ENST00000470094 FOXA2Q9Y261 457 aaPredicted RBP3.11□□□□□ -1.91
BRCA2-202ENST00000470094 FER1L5A0AVI2 2057 aa3.11□□□□□ -1.91
BRCA2-202ENST00000470094 GON4LQ3T8J9 2241 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 TRIM49BA6NDI0 452 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 ZNF732B4DXR9 585 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 GPRIN2O60269 458 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 GRAP2O75791 330 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 CXCL14O95715 111 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 ANGPTL1O95841 491 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 LMO2P25791 158 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 RPL9P32969 192 aaKnown RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 RABIFP47224 123 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 SMSP52788 366 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 EVCP57679 992 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 PDK1Q15118 436 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 SIX1Q15475 284 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 KNOP1Q1ED39 458 aaKnown RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 EIPR1Q53HC9 387 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 DNAJC21Q5F1R6 531 aaKnown RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 SEL1L3Q68CR1 1132 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 SIGLEC15Q6ZMC9 328 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 RFPL4BQ6ZWI9 263 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 CEACAM19Q7Z692 300 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 ASPGQ86U10 573 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 MARCH9Q86YJ5 346 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 TDHQ8IZJ6 230 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 SLC43A2Q8N370 569 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 TMEM99Q8N816 258 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 EXOC6Q8TAG9 804 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 PRCCQ92733 491 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 CFAP36Q96G28 342 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 C1orf147Q96MC9 270 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 SPATA13Q96N96 652 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 TAAR6Q96RI8 345 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 NAP1L3Q99457 506 aaPredicted RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 PRMT1Q99873 361 aaKnown RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 DDX50Q9BQ39 737 aaKnown RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 CCDC28BQ9BUN5 200 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 LRRCC1Q9C099 1032 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 HSD3B7Q9H2F3 369 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 MTIF3Q9H2K0 278 aaKnown RBP3.1□□□□□ -1.91
BRCA2-202ENST00000470094 WDR41Q9HAD4 459 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 SYTL2Q9HCH5 934 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 PRR34Q9NV39 138 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 EXOC6BQ9Y2D4 811 aa3.1□□□□□ -1.91
BRCA2-202ENST00000470094 ZNF318Q5VUA4 2279 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 IGKV6D-41A0A0C4DH26 115 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 TMEM129A0AVI4 362 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ANKDD1BA6NHY2 528 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ACSL4O60488 711 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 GP9P14770 177 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 BCL3P20749 454 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 SRD5A2P31213 254 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 HPDP32754 393 aaPredicted RBP3.09□□□□□ -1.91
BRCA2-202ENST00000470094 GPC3P51654 580 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ATXN3P54252 364 aaPredicted RBP3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ACY1Q03154 408 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 SLC34A1Q06495 639 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 LCP2Q13094 533 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 GAMTQ14353 236 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ECSCRQ19T08 205 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 RFTN2Q52LD8 501 aaPredicted RBP3.09□□□□□ -1.91
BRCA2-202ENST00000470094 C9orf66Q5T8R8 295 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 AGAP7PQ5VUJ5 663 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 TMUB2Q71RG4 321 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 TMEM126BQ8IUX1 230 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 BATF2Q8N1L9 274 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ELMOD1Q8N336 334 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 SMYD1Q8NB12 490 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 SUMF1Q8NBK3 374 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 CSNK1G2-AS1Q8NCQ2 148 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 CNNM3Q8NE01 707 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ANKRD20A12PQ8NF67 263 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 NEK11Q8NG66 645 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 OR13C5Q8NGS8 318 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 KIAA1524Q8TCG1 905 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 SMPDL3AQ92484 453 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 TAF4BQ92750 862 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 FAM46BQ96A09 425 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 BPIFA2Q96DR5 249 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 ZNF560Q96MR9 790 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 FAM111AQ96PZ2 611 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 PINK1Q9BXM7 581 aa3.09□□□□□ -1.91
BRCA2-202ENST00000470094 IDI2Q9BXS1 227 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms