RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 HIST1H2ACQ93077 130 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 NSMCE2Q96MF7 247 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 AGAP3Q96P47 875 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 TMEM237Q96Q45 408 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 SYT11Q9BT88 431 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 DCTN5Q9BTE1 182 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 FUNDC2Q9BWH2 189 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 ATG10Q9H0Y0 220 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 DPEP3Q9H4B8 488 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 TECRQ9NZ01 308 aaKnown RBP4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 THEGQ9P2T0 379 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 DNPEPQ9ULA0 475 aa4.23□□□□□ -1.73
GAPVD1-211ENST00000467707 SHISA7A6NL88 538 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 B4GAT1O43505 415 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 IDH3BO43837 385 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 DUS4LO95620 317 aaKnown RBP4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 PDGFBP01127 241 aaPredicted RBP4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 EZRP15311 586 aaKnown RBP4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 DPEP1P16444 411 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 GAP43P17677 238 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 ACP1P24666 158 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 SFNP31947 248 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 CLK1P49759 484 aaKnown RBP4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 SRPXP78539 464 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 FASTKQ14296 549 aaKnown RBP4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 C2CD6Q53TS8 623 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 ZNF730Q6ZMV8 503 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 ADAMTSL2Q86TH1 951 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 KDM8Q8N371 416 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 CCNYQ8ND76 341 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 ICA1LQ8NDH6 482 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 PCED1BQ96HM7 432 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 CDHR1Q96JP9 859 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 SLC45A3Q96JT2 553 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 RUNDC3BQ96NL0 473 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 C1orf21Q9H246 121 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 GDF3Q9NR23 364 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 ERVK-18Q9QC07 812 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 ASIC3Q9UHC3 531 aa4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 MTF2Q9Y483 593 aaPredicted RBP4.22□□□□□ -1.73
GAPVD1-211ENST00000467707 WDR81Q562E7 1941 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 OR5H15A6NDH6 313 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 CFAP73A6NFT4 308 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 SLC4A1P02730 911 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 MBL2P11226 248 aaPredicted RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 MAPK3P27361 379 aaPredicted RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 SLC1A6P48664 564 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 PITPNBP48739 271 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 HILS1P60008 231 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 FKBP3Q00688 224 aaKnown RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 ELAVL2Q12926 359 aaKnown RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 LY6DQ14210 128 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 EXOSC7Q15024 291 aaKnown RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 PDK1Q15118 436 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 SHROOM1Q2M3G4 852 aaPredicted RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 WSCD2Q2TBF2 565 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 GPAT3Q53EU6 434 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 CDC42EP5Q6NZY7 148 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 METTL7BQ6UX53 244 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 MFSD7Q6UXD7 560 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 Q6ZRG5 221 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 CARM1Q86X55 608 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 PARP8Q8N3A8 854 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 NPRL2Q8WTW4 380 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 PCNPQ8WW12 178 aaKnown RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 CXorf58Q96LI9 332 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 PRICKLE1Q96MT3 831 aaPredicted RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 SPATA13Q96N96 652 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 ZNF577Q9BSK1 485 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 XPO4Q9C0E2 1151 aaKnown RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 STRADBQ9C0K7 418 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 SP140LQ9H930 580 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 PLEKHA3Q9HB20 300 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 THYN1Q9P016 225 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 FAM153AQ9UHL3 310 aa4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 DIMT1Q9UNQ2 313 aaKnown RBP4.21□□□□□ -1.74
GAPVD1-211ENST00000467707 CCDC69A6NI79 296 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 ASB14A6NK59 587 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 MEI4A8MW99 385 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 H7C423 109 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 NTN3O00634 580 aaPredicted RBP4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 SOCS3O14543 225 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 TSPAN2O60636 221 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 SYNGR4O95473 234 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 FHP07954 510 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 ARF4P18085 180 aaPredicted RBP4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 ACADSBP45954 432 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 ASMTP46597 345 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 SMC1AQ14683 1233 aaKnown RBP4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 ZNF146Q15072 292 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 HAGHQ16775 308 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 ECSCRQ19T08 205 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 KNOP1Q1ED39 458 aaKnown RBP4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 TTC31Q49AM3 519 aaPredicted RBP4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 TAF1BQ53T94 588 aaPredicted RBP4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 TEX35Q5T0J7 233 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 CWC27Q6UX04 472 aaKnown RBP4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 FAM131BQ86XD5 332 aa4.2□□□□□ -1.74
GAPVD1-211ENST00000467707 PHC2Q8IXK0 858 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms