RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 CCSO14618 274 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 TTI1O43156 1089 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 PRG2P13727 222 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 GLULP15104 373 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 GLRA1P23415 457 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 ALDH3B1P43353 468 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 CRMP1Q14194 572 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 VWA2Q5GFL6 755 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 REP15Q6BDI9 236 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 CYP4V2Q6ZWL3 525 aaPredicted RBP3.14□□□□□ -1.91
SMC4-207ENST00000467263 SERINC5Q86VE9 423 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 WDR49Q8IV35 697 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 SAMD12Q8N8I0 201 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 TRPV3Q8NET8 790 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 TCP11Q8WWU5 503 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 PRCCQ92733 491 aaPredicted RBP3.14□□□□□ -1.91
SMC4-207ENST00000467263 ESAMQ96AP7 390 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 ULK4Q96C45 1275 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 SNRNP40Q96DI7 357 aaKnown RBP3.14□□□□□ -1.91
SMC4-207ENST00000467263 RAB40CQ96S21 281 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 ADPGKQ9BRR6 497 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 TNFRSF19Q9NS68 423 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 ITM2BQ9Y287 266 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 EXOC6BQ9Y2D4 811 aa3.14□□□□□ -1.91
SMC4-207ENST00000467263 KLF2Q9Y5W3 355 aaPredicted RBP3.14□□□□□ -1.91
SMC4-207ENST00000467263 KIAA0513O60268 411 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 SRPX2O60687 465 aaPredicted RBP3.13□□□□□ -1.91
SMC4-207ENST00000467263 ANXA9O76027 345 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 KBTBD11O94819 623 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 GSTA2P09210 222 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 GPX3P22352 226 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 SERPINB6P35237 376 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 HMGCLP35914 325 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 CCR4P51679 360 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 IST1P53990 364 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 MFGE8Q08431 387 aaPredicted RBP3.13□□□□□ -1.91
SMC4-207ENST00000467263 NFE2L1Q14494 772 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 ABRAXAS2Q15018 415 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 TIMM50Q3ZCQ8 353 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 DCAF12Q5T6F0 453 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 SIAH3Q8IW03 269 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 NAXDQ8IW45 347 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 SYCP3Q8IZU3 236 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 MRAPQ8TCY5 172 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 GGHQ92820 318 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 SERAC1Q96JX3 654 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 MCCC1Q96RQ3 725 aaPredicted RBP3.13□□□□□ -1.91
SMC4-207ENST00000467263 RANBP9Q96S59 729 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 SSX3Q99909 188 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 SLITRK2Q9H156 845 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 CXXC4Q9H2H0 198 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 DNAJC17Q9NVM6 304 aaKnown RBP3.13□□□□□ -1.91
SMC4-207ENST00000467263 RCOR3Q9P2K3 495 aaPredicted RBP3.13□□□□□ -1.91
SMC4-207ENST00000467263 SLC6A5Q9Y345 797 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 UMODL1Q5DID0 1318 aa3.13□□□□□ -1.91
SMC4-207ENST00000467263 ZNF487B1APH4 448 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 PSMA7O14818 248 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 CSDE1O75534 798 aaKnown RBP3.12□□□□□ -1.91
SMC4-207ENST00000467263 PIGRP01833 764 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 NUDT17P0C025 328 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 CCDC159P0C7I6 412 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 CPA3P15088 417 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 B4GALT1P15291 398 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 FOSL2P15408 326 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 MTIF2P46199 727 aaKnown RBP3.12□□□□□ -1.91
SMC4-207ENST00000467263 BRCC3P46736 316 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 RPL34P49207 117 aaKnown RBP3.12□□□□□ -1.91
SMC4-207ENST00000467263 GSTO1P78417 241 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 YWHAHQ04917 246 aaPredicted RBP3.12□□□□□ -1.91
SMC4-207ENST00000467263 LCP2Q13094 533 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 WSCD2Q2TBF2 565 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 LIPJQ5W064 366 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 CLYBLQ8N0X4 340 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 NUP93Q8N1F7 819 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 OR1K1Q8NGR3 316 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 FAM46BQ96A09 425 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 CNOT6LQ96LI5 555 aaKnown RBP3.12□□□□□ -1.91
SMC4-207ENST00000467263 AGPAT1Q99943 283 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 ZNF350Q9GZX5 532 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 WWP1Q9H0M0 922 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 ZWILCHQ9H900 591 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 COPS7BQ9H9Q2 264 aaPredicted RBP3.12□□□□□ -1.91
SMC4-207ENST00000467263 ZNF446Q9NWS9 450 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 MIS18AQ9NYP9 233 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 EIF3KQ9UBQ5 218 aaKnown RBP3.12□□□□□ -1.91
SMC4-207ENST00000467263 B4GALT7Q9UBV7 327 aa3.12□□□□□ -1.91
SMC4-207ENST00000467263 A0A0A6YYC8 382 aaPredicted RBP3.11□□□□□ -1.91
SMC4-207ENST00000467263 I3L1I5 382 aaPredicted RBP3.11□□□□□ -1.91
SMC4-207ENST00000467263 SLC33A1O00400 549 aaPredicted RBP3.11□□□□□ -1.91
SMC4-207ENST00000467263 MCF2LO15068 1137 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 STX6O43752 255 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 EPOP01588 193 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 DUX4L4P0CJ87 422 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 UMPSP11172 480 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 CHRNA3P32297 505 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 HMGCS2P54868 508 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 NAAAQ02083 359 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 GABPAQ06546 454 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 LTB4RQ15722 352 aa3.11□□□□□ -1.91
SMC4-207ENST00000467263 KBTBD12Q3ZCT8 623 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms