RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ASF1BQ9NVP2 202 aa16.41■□□□□ 0.22
CPSF4-209ENST00000465132 P4HTMQ9NXG6 502 aa16.41■□□□□ 0.22
CPSF4-209ENST00000465132 FAM53CQ9NYF3 392 aa16.41■□□□□ 0.22
CPSF4-209ENST00000465132 MARCOQ9UEW3 520 aaPredicted RBP16.41■□□□□ 0.22
CPSF4-209ENST00000465132 PSME2Q9UL46 239 aa16.41■□□□□ 0.22
CPSF4-209ENST00000465132 DAPP1Q9UN19 280 aa16.41■□□□□ 0.22
CPSF4-209ENST00000465132 MRPS2Q9Y399 296 aaKnown RBP16.41■□□□□ 0.22
CPSF4-209ENST00000465132 MAU2Q9Y6X3 613 aa16.41■□□□□ 0.22
CPSF4-209ENST00000465132 SCN3AQ9NY46 2000 aa16.41■□□□□ 0.22
CPSF4-209ENST00000465132 WIPF3A6NGB9 483 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 LSM1O15116 133 aaKnown RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 POLR3GO15318 223 aaPredicted RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 CHST10O43529 356 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 PCDH7O60245 1069 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 CNOT3O75175 753 aaKnown RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 CBX6O95503 412 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 ETHE1O95571 254 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 KLK1P06870 262 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 ANXA4P09525 319 aaPredicted RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 FAM58BPP0C7Q3 252 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 ATXN8OSP0DMR3 200 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 PRPS2P11908 318 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 LBPP18428 481 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 TIA1P31483 386 aaKnown RBP eCLIP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 RPL3P39023 403 aaKnown RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 XCR1P46094 333 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 OR1D4P47884 311 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 GALNTL6Q49A17 601 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 MRPL14Q6P1L8 145 aaKnown RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 IKBIPQ70UQ0 350 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 SPATA19Q7Z5L4 167 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 PPP1R32Q7Z5V6 425 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 UBE3DQ7Z6J8 389 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 PDSS2Q86YH6 399 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 ZNF595Q8IYB9 648 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 RNF175Q8N4F7 328 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 CISD2Q8N5K1 135 aaKnown RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 FNDC5Q8NAU1 212 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 CEP70Q8NHQ1 597 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 TBC1D20Q96BZ9 403 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 TUBB1Q9H4B7 451 aa16.4■□□□□ 0.22
CPSF4-209ENST00000465132 ZNF552Q9H707 407 aaPredicted RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 NOP53Q9NZM5 478 aaKnown RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 ERRFI1Q9UJM3 462 aaPredicted RBP16.4■□□□□ 0.22
CPSF4-209ENST00000465132 IGLV3-12A0A075B6K2 115 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 KLHL41O60662 606 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 PEX11AO75192 247 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 UMODP07911 640 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 ALOX15P16050 662 aaPredicted RBP16.39■□□□□ 0.21
CPSF4-209ENST00000465132 CPN2P22792 545 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 CERS1P27544 350 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 SOX8P57073 446 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 FOXL2P58012 376 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 ERVK-8P63133 956 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 EMX2Q04743 252 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 ZNF763Q0D2J5 394 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 CRB2Q5IJ48 1285 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 C6orf136Q5SQH8 315 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 NOXRED1Q6NXP6 359 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 Q6ZSR9 355 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 TMEM151BQ8IW70 566 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 SAMD14Q8IZD0 417 aaPredicted RBP16.39■□□□□ 0.21
CPSF4-209ENST00000465132 CA13Q8N1Q1 262 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 METTL27Q8N6F8 245 aaPredicted RBP16.39■□□□□ 0.21
CPSF4-209ENST00000465132 AMER3Q8N944 861 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 ACTRT2Q8TDY3 377 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 TANKQ92844 425 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 HCN3Q9P1Z3 774 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 TRIM33Q9UPN9 1127 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 MMACHCQ9Y4U1 282 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 CCL27Q9Y4X3 112 aa16.39■□□□□ 0.21
CPSF4-209ENST00000465132 A0A0A6YYD5 115 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 A0A0G2JN53 185 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 MASP2O00187 686 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 RTCAO00442 366 aaKnown RBP16.38■□□□□ 0.21
CPSF4-209ENST00000465132 DIAPH2O60879 1101 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 LDLRP01130 860 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 FHP07954 510 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 DRD2P14416 443 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 AQP5P55064 265 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 LIM2P55344 173 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 HSD17B7P56937 341 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 RPL38P63173 70 aaKnown RBP16.38■□□□□ 0.21
CPSF4-209ENST00000465132 NXNQ6DKJ4 435 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 OGFOD2Q6N063 350 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 EPGNQ6UW88 154 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 PRSS41Q7RTY9 318 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 MAMDC2Q7Z304 686 aaPredicted RBP16.38■□□□□ 0.21
CPSF4-209ENST00000465132 CPLX4Q7Z7G2 160 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 TMEM132CQ8N3T6 1108 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 STT3BQ8TCJ2 826 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 METTL21AQ8WXB1 218 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 TM9SF4Q92544 642 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 APIPQ96GX9 242 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 PRPF18Q99633 342 aaKnown RBP16.38■□□□□ 0.21
CPSF4-209ENST00000465132 AICDAQ9GZX7 198 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 SEMA3GQ9NS98 782 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 SLC22A11Q9NSA0 550 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 FGFR1OP2Q9NVK5 253 aa16.38■□□□□ 0.21
CPSF4-209ENST00000465132 ASIC5Q9NY37 505 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms