RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 GDPGP1Q6ZNW5 385 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 LEMD2Q8NC56 503 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 CCNYQ8ND76 341 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 OR6F1Q8NGZ6 308 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 KIAA1524Q8TCG1 905 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 UBE2Q2Q8WVN8 375 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 PCED1BQ96HM7 432 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 RPGRIP1Q96KN7 1286 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 GPR137Q96N19 417 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 TMEM237Q96Q45 408 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 PKP2Q99959 881 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 WWP1Q9H0M0 922 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 CARD9Q9H257 536 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 SLC26A1Q9H2B4 701 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 PARLQ9H300 379 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 DPEP3Q9H4B8 488 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 PLEKHA3Q9HB20 300 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 NMUR1Q9HB89 426 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 SYTL2Q9HCH5 934 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 GDF3Q9NR23 364 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 TECRQ9NZ01 308 aaKnown RBP3.42□□□□□ -1.86
CLK1-208ENST00000464454 NUDT4Q9NZJ9 180 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 VPS54Q9P1Q0 977 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 PAK5Q9P286 719 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 MRTO4Q9UKD2 239 aaKnown RBP3.42□□□□□ -1.86
CLK1-208ENST00000464454 RPH3AQ9Y2J0 694 aaPredicted RBP3.42□□□□□ -1.86
CLK1-208ENST00000464454 MOB4Q9Y3A3 225 aa3.42□□□□□ -1.86
CLK1-208ENST00000464454 IGHV4-30-2A0A087WSY4 118 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 IGHV3-38A0A0C4DH36 116 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 OR5H15A6NDH6 313 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 CCDC69A6NI79 296 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 TMCO5BA8MYB1 307 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 NME2P1O60361 137 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 CSO75390 466 aaKnown RBP3.41□□□□□ -1.86
CLK1-208ENST00000464454 SEC22BO75396 215 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 CSDE1O75534 798 aaKnown RBP3.41□□□□□ -1.86
CLK1-208ENST00000464454 CCDC192P0DO97 292 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 PCP11498 1178 aaKnown RBP3.41□□□□□ -1.86
CLK1-208ENST00000464454 MARCKSP29966 332 aaPredicted RBP3.41□□□□□ -1.86
CLK1-208ENST00000464454 PPP2R1AP30153 589 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 ZFP36L2P47974 494 aaKnown RBP3.41□□□□□ -1.86
CLK1-208ENST00000464454 GEMP55040 296 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 STARD6P59095 220 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 SRP54P61011 504 aaKnown RBP3.41□□□□□ -1.86
CLK1-208ENST00000464454 SSTP61278 116 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 CDKL1Q00532 357 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 WSCD2Q2TBF2 565 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 PRAMEF7Q5VXH5 474 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 NKAIN2Q5VXU1 208 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 HIST2H2AA3Q6FI13 130 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 RTL6Q6ICC9 239 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 CNSTQ6PJW8 725 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 ZNF730Q6ZMV8 503 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 LYG1Q8N1E2 194 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 GVQW1Q8N7I0 195 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 AQP11Q8NBQ7 271 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 PRSS33Q8NF86 280 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 TMEM185AQ8NFB2 350 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 SLC13A3Q8WWT9 602 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 PRICKLE1Q96MT3 831 aaPredicted RBP3.41□□□□□ -1.86
CLK1-208ENST00000464454 RAB40CQ96S21 281 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 LRRC61Q9BV99 259 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 FUNDC2Q9BWH2 189 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 PANK3Q9H999 370 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 IL1RAPQ9NPH3 570 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 NDUFA13Q9P0J0 144 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 KCNN3Q9UGI6 736 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 NARFQ9UHQ1 456 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 CCPG1Q9ULG6 757 aa3.41□□□□□ -1.86
CLK1-208ENST00000464454 RNF103-CHMP3A0A140T963 221 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 ASB14A6NK59 587 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 SOCS3O14543 225 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 SLC4A1P02730 911 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 ALPPP05187 535 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 APRTP07741 180 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 ADORA3P0DMS8 318 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 ALPPL2P10696 532 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 CD1DP15813 335 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 SELEP16581 610 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 TNFRSF4P43489 277 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 PITPNBP48739 271 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 SLC8A3P57103 927 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 PDK1Q15118 436 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 KNOP1Q1ED39 458 aaKnown RBP3.4□□□□□ -1.87
CLK1-208ENST00000464454 EPC2Q52LR7 807 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 HERC4Q5GLZ8 1057 aaPredicted RBP3.4□□□□□ -1.87
CLK1-208ENST00000464454 DDI2Q5TDH0 399 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 ADAMTSL2Q86TH1 951 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 ZNF619Q8N2I2 560 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 Q8NBF4 154 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 LRRC15Q8TF66 581 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 PCNPQ8WW12 178 aaKnown RBP3.4□□□□□ -1.87
CLK1-208ENST00000464454 C11orf52Q96A22 123 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 TMEM186Q96B77 213 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 RAB39BQ96DA2 213 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 MRPL53Q96EL3 112 aaKnown RBP3.4□□□□□ -1.87
CLK1-208ENST00000464454 SLC45A3Q96JT2 553 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 TNFRSF13CQ96RJ3 184 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 PYGO2Q9BRQ0 406 aa3.4□□□□□ -1.87
CLK1-208ENST00000464454 XPO4Q9C0E2 1151 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms