RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 PIPSLA2A3N6 862 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 KLHL33A6NCF5 533 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ANKRD33BA6NCL7 494 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 BCKDKO14874 412 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 NOL3O60936 208 aaKnown RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 JRKO75564 520 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 FKBP9O95302 570 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 CPSF4O95639 269 aaKnown RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF682O95780 498 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ERGP11308 486 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ITIH1P19827 911 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 EEF1B2P24534 225 aaKnown RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 IGFBP5P24593 272 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 TPD52P55327 224 aaPredicted RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 RPS13P62277 151 aaKnown RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 TAP2Q03519 686 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 FADDQ13158 208 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 DDX39BQ13838 428 aaKnown RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 SPIDRQ14159 915 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ARHGAP19Q14CB8 494 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 NR0B2Q15466 257 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 RGNQ15493 299 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 IQCCQ4KMZ1 466 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 LRRC23Q53EV4 343 aaPredicted RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 FAHD1Q6P587 224 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 NXPE4Q6UWF7 544 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 LCTLQ6UWM7 567 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 DHRS13Q6UX07 377 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 TMPRSS11BQ86T26 416 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 TRIM74Q86UV6 250 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ZC3H7AQ8IWR0 971 aaKnown RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 SLC35F3Q8IY50 421 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 SYTL1Q8IYJ3 562 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 CFAP206Q8IYR0 622 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 CLECL1Q8IZS7 167 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 HS3ST5Q8IZT8 346 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 SPARTQ8N0X7 666 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 METTL4Q8N3J2 472 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 NATD1Q8N6N6 113 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 FAM46DQ8NEK8 389 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 OR6C4Q8NGE1 309 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 SLC5A11Q8WWX8 675 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 SH3KBP1Q96B97 665 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 HSH2DQ96JZ2 352 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 VNN3Q9NY84 501 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 BAG5Q9UL15 447 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 ABCG2Q9UNQ0 655 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 EXO1Q9UQ84 846 aaKnown RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 GPSM3Q9Y4H4 160 aa9.42□□□□□ -0.9
PTPRD-207ENST00000463477 DNMT3AQ9Y6K1 912 aaPredicted RBP9.42□□□□□ -0.9
PTPRD-207ENST00000463477 HEATR5BQ9P2D3 2071 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 A8MVJ9 347 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 SLC1A7O00341 560 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 TBX19O60806 448 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 SEMA3DO95025 777 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 C9P02748 559 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 FURINP09958 794 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 MYF5P13349 255 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF8P17098 575 aaPredicted RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 SPINK2P20155 84 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 PTX3P26022 381 aaPredicted RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 SERPINB1P30740 379 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 POLR2IP36954 125 aaKnown RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 HSD17B2P37059 387 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 EMP3P54852 163 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 SLBPQ14493 270 aaKnown RBP eCLIP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 HKDC1Q2TB90 917 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 CTU2Q2VPK5 515 aaKnown RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 CCDC157Q569K6 752 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 FAM71E1Q6IPT2 247 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 LAIR2Q6ISS4 152 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 CCDC80Q76M96 950 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 COMMD6Q7Z4G1 85 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 ARHGAP22Q7Z5H3 698 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 C11orf96Q7Z7L8 435 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 CYP4Z1Q86W10 505 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 C17orf82Q86X59 251 aaPredicted RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 TRAPPC5Q8IUR0 188 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF547Q8IVP9 402 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 C11orf65Q8NCR3 313 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 OR52N2Q8NGI0 321 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 LZICQ8WZA0 190 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 NAT6Q93015 286 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 MUL1Q969V5 352 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 RAD51AP1Q96B01 352 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 ZNF764Q96H86 408 aaPredicted RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 C7orf34Q96L11 122 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 OR2M4Q96R27 311 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 PITX2Q99697 317 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 PITHD1Q9GZP4 211 aaPredicted RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 OR2AG1Q9H205 316 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 OR52A5Q9H2C5 316 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 ADNPQ9H2P0 1102 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 TMEM38AQ9H6F2 299 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 CCDC177Q9NQR7 707 aaPredicted RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 ADPRHL2Q9NX46 363 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 TAAR2Q9P1P5 351 aa9.41□□□□□ -0.9
PTPRD-207ENST00000463477 ARHGEF17Q96PE2 2063 aaPredicted RBP9.41□□□□□ -0.9
PTPRD-207ENST00000463477 ASPMQ8IZT6 3477 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms