RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 TAP2Q03519 686 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 CSHL1Q14406 222 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 TSNQ15631 228 aaKnown RBP10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 RTL6Q6ICC9 239 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 UBE2R2Q712K3 238 aaPredicted RBP10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 WDR53Q7Z5U6 358 aaPredicted RBP10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PACS2Q86VP3 889 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 CYP4Z2PQ8N1L4 340 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PLPP5Q8NEB5 264 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 OR5T3Q8NGG3 340 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 OR6Y1Q8NGX8 325 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ZNF480Q8WV37 535 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 RHBDF1Q96CC6 855 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 MRRFQ96E11 262 aaKnown RBP10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PRAP1Q96NZ9 151 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SMC6Q96SB8 1091 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PKP4Q99569 1192 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ACBD3Q9H3P7 528 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 DEPPQ9NTK1 212 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 NUDT4Q9NZJ9 180 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PTBP2Q9UKA9 531 aaKnown RBP10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 EDARQ9UNE0 448 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 HEATR5BQ9P2D3 2071 aa10.49□□□□□ -0.73
PRAMEF35P-201ENST00000458709 TLDC2A0PJX2 215 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PINLYPA6NC86 204 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 FAM166BA8MTA8 275 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 FCHO1O14526 889 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 LY6G6DO95868 133 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SYF2O95926 243 aaKnown RBP10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ALDH18A1P54886 795 aaKnown RBP10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 KEAP1Q14145 624 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SETDB1Q15047 1291 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PCBP2Q15366 365 aaKnown RBP eCLIP10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SULT1C3Q6IMI6 304 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ZNF585AQ6P3V2 769 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 B3GNT6Q6ZMB0 384 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 CHSY3Q70JA7 882 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 GPSM1Q86YR5 675 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SPNS2Q8IVW8 549 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 KCT2Q8NC54 265 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 CCDC126Q96EE4 140 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SARGQ9BW04 601 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 TRIM54Q9BYV2 358 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PCBD2Q9H0N5 130 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ATG10Q9H0Y0 220 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 VPS11Q9H270 941 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ZNF395Q9H8N7 513 aaPredicted RBP10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ANKHQ9HCJ1 492 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 TMEM216Q9P0N5 145 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 XPR1Q9UBH6 696 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 CBLCQ9ULV8 474 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 NAALAD2Q9Y3Q0 740 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 LIPGQ9Y5X9 500 aa10.48□□□□□ -0.73
PRAMEF35P-201ENST00000458709 FBN1P35555 2871 aaKnown RBP10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 A0A0G2JMM0 328 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 A0A1W2PPB8 328 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 A0A1W2PRS3 328 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 FEZF1A0PJY2 475 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 NPEPPSL1A6NEC2 478 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SAGE2PA6NJ88 616 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 FIGNL2A6NMB9 653 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 KIR3DP1A8MWS1 328 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 G3V2L1 256 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 COPEO14579 308 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 DNAJB6O75190 326 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 HIST1H2AGP0C0S8 130 aaPredicted RBP10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 HIST1H2ADP20671 130 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SAT1P21673 171 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 UQCRC1P31930 480 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PRKAA2P54646 552 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 DNAJB13P59910 316 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 PPIAP62937 165 aaKnown RBP10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ABATP80404 500 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SLC25A35Q3KQZ1 300 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 FLYWCH1Q4VC44 716 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 TTMPQ5BVD1 217 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 THEMIS2Q5TEJ8 643 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ARMC10Q8N2F6 343 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 L3HYPDHQ96EM0 354 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 WDR34Q96EX3 536 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 HIST1H2AHQ96KK5 128 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 OR1F2PQ96R84 312 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 HIST1H2AJQ99878 128 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 H2AFJQ9BTM1 129 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 EHD1Q9H4M9 534 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ALG9Q9H6U8 611 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ZDHHC11Q9H8X9 412 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 MID2Q9UJV3 735 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 TNPO3Q9Y5L0 923 aaKnown RBP10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ZNF407Q9C0G0 2248 aa10.47□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SCN3AQ9NY46 2000 aa10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 DNAJC13O75165 2243 aa10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 SMIM23A6NLE4 172 aa10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 BIRC5O15392 142 aa10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 TAPBPO15533 448 aa10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ITGA10O75578 1167 aa10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 FHP07954 510 aa10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 RPS17P08708 135 aaKnown RBP10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 CREB1P16220 341 aa10.46□□□□□ -0.73
PRAMEF35P-201ENST00000458709 ATP5F1P24539 256 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms