RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 GPSM1Q86YR5 675 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF595Q8IYB9 648 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GCNT2Q8N0V5 402 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OR2L5Q8NG80 312 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OR14A16Q8NHC5 309 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GOT1L1Q8NHS2 421 aaPredicted RBP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM45AQ8TCE6 357 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF721Q8TF20 911 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MAIP1Q8WWC4 291 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ATL1Q8WXF7 558 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NINJ1Q92982 152 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 UCN3Q969E3 161 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ANKRD9Q96BM1 317 aaPredicted RBP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RHBDF1Q96CC6 855 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SPACA9Q96E40 222 aaPredicted RBP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ALPK1Q96QP1 1244 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MDFIQ99750 246 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ERVK-6Q9BXR3 956 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ALOXE3Q9BYJ1 711 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRIM54Q9BYV2 358 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRIM31Q9BZY9 425 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PROK2Q9HC23 129 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EHD3Q9NZN3 535 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 COPS7AQ9UBW8 275 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DAPP1Q9UN19 280 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ERVK-19Q9WJR5 959 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MRPS33Q9Y291 106 aaKnown RBP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 OARD1Q9Y530 152 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 WIF1Q9Y5W5 379 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CHCHD2Q9Y6H1 151 aaPredicted RBP5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 KCNE2Q9Y6J6 123 aa5.51□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FBN1P35555 2871 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MED12LQ86YW9 2145 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NBEAL1Q6ZS30 2694 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 A0A1B0GVC2 190 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MAGEB16A2A368 324 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FAM221AA4D161 298 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 URADA6NGE7 173 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRIM64A6NGJ6 449 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRIM64BA6NI03 449 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CLCA1A8K7I4 914 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 H7C1Q1 480 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SMAD7O15105 426 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CCNT2O60583 730 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 WDR1O75083 606 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRAPPC6AO75865 159 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RAF1P04049 648 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GBAP04062 536 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CLPSP04118 112 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 IGKV3-11P04433 115 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C1GALT1C1LP0DN25 315 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NID1P14543 1247 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GNAZP19086 355 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CNR1P21554 472 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ADSLP30566 484 aaPredicted RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SSTR4P31391 388 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CPOXP36551 454 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 HNRNPH2P55795 449 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DCAF7P61962 342 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CRYZQ08257 329 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FOXF2Q12947 444 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DUSP8Q13202 625 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DOC2AQ14183 400 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TOMM20Q15388 145 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PDK4Q16654 411 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CYP1B1Q16678 543 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DEFB113Q30KQ7 82 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF791Q3KP31 576 aaPredicted RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ADPRMQ3LIE5 342 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 EIPR1Q53HC9 387 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 Q5PR19 223 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RIPPLY2Q5TAB7 128 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C18orf63Q68DL7 685 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 PAOXQ6QHF9 649 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CLEC9AQ6UXN8 241 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 CHSY3Q70JA7 882 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LUZP2Q86TE4 346 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ADAMTSL2Q86TH1 951 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 MYLK4Q86YV6 388 aaPredicted RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GPALPP1Q8IXQ4 340 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LMNTD2Q8IXW0 634 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TMEM132CQ8N3T6 1108 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 FBXW8Q8N3Y1 598 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RASGEF1CQ8N431 466 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 LIX1Q8N485 282 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ACOT4Q8N9L9 421 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 C9orf106Q8NAJ2 232 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 GOLM1Q8NBJ4 401 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRIM58Q8NG06 486 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 NEIL3Q8TAT5 605 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DAZLQ92904 295 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 RNASE6Q93091 150 aaKnown RBP5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SARAFQ96BY9 339 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 VPS39Q96JC1 886 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 ZNF597Q96LX8 424 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DGAT2Q96PD7 388 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 TRIB1Q96RU8 372 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 SERINC2Q96SA4 455 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 DOHHQ9BU89 302 aa5.5□□□□□ -1.53
HLA-DPA3-207ENST00000454398 WWTR1Q9GZV5 400 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms