RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 WDR34Q96EX3 536 aa13.16□□□□□ -0.3
LYSMD3-202ENST00000453259 FBXL20Q96IG2 436 aa13.16□□□□□ -0.3
LYSMD3-202ENST00000453259 TBCDQ9BTW9 1192 aa13.16□□□□□ -0.3
LYSMD3-202ENST00000453259 EFCAB11Q9BUY7 163 aa13.16□□□□□ -0.3
LYSMD3-202ENST00000453259 CNPPD1Q9BV87 410 aa13.16□□□□□ -0.3
LYSMD3-202ENST00000453259 MS4A12Q9NXJ0 267 aa13.16□□□□□ -0.3
LYSMD3-202ENST00000453259 CD8B2A6NJW9 211 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 ARHGEF9O43307 516 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 IGKV3-11P04433 115 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 CERS1P27544 350 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 SERPINB1P30740 379 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 OPRM1P35372 400 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 STT3AP46977 705 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 FNTAP49354 379 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 DCAF7P61962 342 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 ASPHQ12797 758 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 LAPTM5Q13571 262 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 TMEM35AQ53FP2 167 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 PAGE2BQ5JRK9 111 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 TEDDM1Q5T9Z0 273 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 NSUN5P2Q63ZY6 315 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 SEM1Q6ZVN7 128 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 WFDC11Q8NEX6 87 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 RHBDF1Q96CC6 855 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 LRRC39Q96DD0 335 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 PTCD3Q96EY7 689 aaKnown RBP13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 VPS39Q96JC1 886 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 CSF3RQ99062 836 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 PELOQ9BRX2 385 aaKnown RBP13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 PRDM14Q9GZV8 571 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 PLEKHF2Q9H8W4 249 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 POPDC3Q9HBV1 291 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 PRDM7Q9NQW5 492 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 DNHD1Q96M86 4753 aa13.15□□□□□ -0.3
LYSMD3-202ENST00000453259 A0A0G2JN53 185 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 LRRC3CA6NJW4 275 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 OR6C76A6NM76 312 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 CAPN14A8MX76 684 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 CLGNO14967 610 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 ZNF354AO60765 605 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 TBX6O95947 436 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 C1QAP02745 245 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 FBXO45P0C2W1 286 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 CXCR5P32302 372 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 GGT5P36269 586 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 PIGAP37287 484 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 RPL21P46778 160 aaKnown RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 PLIN5Q00G26 463 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 CRYZQ08257 329 aaKnown RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 NHSL2Q5HYW2 709 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 POMZP3Q6PJE2 187 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 CLEC9AQ6UXN8 241 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 SMPDL3BQ92485 455 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 UBE2E3Q969T4 207 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 ARSGQ96EG1 525 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 RBM18Q96H35 190 aaKnown RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 SENP5Q96HI0 755 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 PBKQ96KB5 322 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 ZNF597Q96LX8 424 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 ZFP3Q96NJ6 502 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 RUNDC3BQ96NL0 473 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 SECISBP2Q96T21 854 aaKnown RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 SEMA4BQ9NPR2 832 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 LZTFL1Q9NQ48 299 aa13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 PPANQ9NQ55 473 aaKnown RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 CHCHD2Q9Y6H1 151 aaPredicted RBP13.14□□□□□ -0.31
LYSMD3-202ENST00000453259 C15orf38-AP3S2A0A0A6YYH1 394 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 GOLGA6L10A0A0M3HER8 536 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 MBD3L4A6NDZ8 208 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 MBD3L3A6NE82 208 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 NPEPPSL1A6NEC2 478 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 MBD3L5A6NJ08 208 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 CLCA1A8K7I4 914 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 CDC7O00311 574 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 CES2O00748 559 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 CDH16O75309 829 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 SNX4O95219 450 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 ETHE1O95571 254 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 RFPL3SP0C7P2 107 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 TMED10P49755 219 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 ARFIP1P53367 373 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 EEF1A1P68104 462 aaKnown RBP13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 DUSP8Q13202 625 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 PCBP2Q15366 365 aaKnown RBP eCLIP13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 TBCCQ15814 346 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 NTRK2Q16620 822 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 HIST2H2ACQ16777 129 aaPredicted RBP13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 EEF1A1P5Q5VTE0 462 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 HIST2H2AA3Q6FI13 130 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 SCIMPQ6UWF3 145 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 LYPD8Q6UX82 237 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 VN1R5Q7Z5H4 357 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 C9orf40Q8IXQ3 194 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 TAGAPQ8N103 731 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 PDIK1LQ8N165 341 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 LRRC75A-AS1Q8N1F1 130 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 ZNF321PQ8N8H1 164 aa13.13□□□□□ -0.31
LYSMD3-202ENST00000453259 NAXEQ8NCW5 288 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms