RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	ATG4B	Q9Y4P1	393 aa		14.71	□□□□□ -0.05
HDLBP-223	ENST00000449864	GTF3C1	Q12789	2109 aa		14.71	□□□□□ -0.06
HDLBP-223	ENST00000449864		A1L4Q6	167 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	SMIM23	A6NLE4	172 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	TMPRSS11D	O60235	418 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	OR10H2	O60403	315 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	GBA	P04062	536 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	ATP5F1	P24539	256 aa	Predicted RBP	14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	TNFRSF8	P28908	595 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	GPR143	P51810	404 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	CLC	Q05315	142 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	RBPJ	Q06330	500 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	LETMD1	Q6P1Q0	360 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	PAGE2	Q7Z2X7	111 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	SLC22A9	Q8IVM8	553 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	TMEM151A	Q8N4L1	468 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	TRPC4AP	Q8TEL6	797 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	ASB15	Q8WXK1	588 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	FRMD6	Q96NE9	622 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	TMEM237	Q96Q45	408 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	PELO	Q9BRX2	385 aa	Known RBP	14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	MRPL1	Q9BYD6	325 aa	Known RBP	14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	LIN28A	Q9H9Z2	209 aa	Known RBP	14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	AHSP	Q9NZD4	102 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	SLC12A4	Q9UP95	1085 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	ERVK-11	Q9UQG0	969 aa		14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	KLF13	Q9Y2Y9	288 aa	Predicted RBP	14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864	YARS2	Q9Y2Z4	477 aa	Known RBP	14.7	□□□□□ -0.06
HDLBP-223	ENST00000449864		A0A1B0GTL3	188 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	GLOD5	A6NK44	160 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864		A8MVJ9	347 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	LRRTM2	O43300	516 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	PROM1	O43490	865 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	PRKN	O60260	465 aa	Predicted RBP	14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	DLX3	O60479	287 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	GLRA3	O75311	464 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	OR2J2	O76002	312 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	OR4F21	O95013	312 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	AIFM1	O95831	613 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	LDLR	P01130	860 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	SHBG	P04278	402 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	ALOX15	P16050	662 aa	Predicted RBP	14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	ZNF24	P17028	368 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	KRT15	P19012	456 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	SLCO1A2	P46721	670 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	IGLV3-21	P80748	117 aa	Predicted RBP	14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	BIK	Q13323	160 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	RASA2	Q15283	850 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	ZNF678	Q5SXM1	525 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	C1QL3	Q5VWW1	255 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	OR52E8	Q6IFG1	317 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	C16orf47	Q6ZP98	133 aa	Predicted RBP	14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	GPRIN3	Q6ZVF9	776 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	ZNF321P	Q8N8H1	164 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	MYRIP	Q8NFW9	859 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	SELENOM	Q8WWX9	145 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	14.69	□□□□□ -0.06	6e-8	■■■□□ 17.2
HDLBP-223	ENST00000449864	RBM18	Q96H35	190 aa	Known RBP	14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	ART5	Q96L15	291 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	TRIM45	Q9H8W5	580 aa	Predicted RBP	14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	PPCS	Q9HAB8	311 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	HPF1	Q9NWY4	346 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	MYOT	Q9UBF9	498 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	PLEKHB1	Q9UF11	243 aa	Predicted RBP	14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	DCDC2	Q9UHG0	476 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	STK38L	Q9Y2H1	464 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	ASB4	Q9Y574	426 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	MYO7B	Q6PIF6	2116 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864	DOPEY1	Q5JWR5	2465 aa		14.69	□□□□□ -0.06
HDLBP-223	ENST00000449864		A0A1B0GUH1	482 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864		A0A1W2PPM1	405 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864		A0A1W2PR48	441 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	ASPDH	A6ND91	283 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	NPIPA5	E9PKD4	350 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	WWP2	O00308	870 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	PPP6C	O00743	305 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	GPR75	O95800	540 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	PDYN	P01213	254 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	KLK1	P06870	262 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	HMOX2	P30519	316 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	HSD17B3	P37058	310 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	HK2	P52789	917 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	RNF4	P78317	190 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	UNC50	Q53HI1	259 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	CCNYL2	Q5T2Q4	361 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	MRM1	Q6IN84	353 aa	Known RBP	14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	ZNF227	Q86WZ6	799 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	GPALPP1	Q8IXQ4	340 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	ST13P4	Q8IZP2	240 aa	Predicted RBP	14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	CPSF7	Q8N684	471 aa	Known RBP	14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	CDYL2	Q8N8U2	506 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	OR5L2	Q8NGL0	311 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	OR8K3	Q8NH51	312 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	MZB1	Q8WU39	189 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	PPWD1	Q96BP3	646 aa	Known RBP	14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	MAGED4	Q96JG8	741 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	CNPPD1	Q9BV87	410 aa		14.68	□□□□□ -0.06
HDLBP-223	ENST00000449864	BRF2	Q9HAW0	419 aa		14.68	□□□□□ -0.06

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms