RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 GTF2H2CQ6P1K8 395 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TRAPPC6BQ86SZ2 158 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PQLC3Q8N755 202 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 WDR24Q96S15 920 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 LHPPQ9H008 270 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 C12orf49Q9H741 205 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PROCRQ9UNN8 238 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 GMEB1Q9Y692 573 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 MYOCOSA0A1B0GUC4 107 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TCP11X1B4DZS4 312 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ERVH48-1M5A8F1 160 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 MOSPD3O75425 235 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 C2P06681 752 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 LPLP06858 475 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CHRM5P08912 532 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PPIBP23284 216 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC1A2P43004 574 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 NCBP2P52298 156 aaKnown RBP eCLIP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CTSCP53634 463 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 MAGOHP61326 146 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 RPS13P62277 151 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SNRPD2P62316 118 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 EEF1A1P68104 462 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PHC1P78364 1004 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 NFYCQ13952 458 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 FZD2Q14332 565 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SLC5A12Q1EHB4 618 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TXNRD3NBQ6F5E7 133 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR52E8Q6IFG1 317 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PRSS33Q8NF86 280 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TSPAN14Q8NG11 270 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 OR11G2Q8NGC1 345 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 MOSPD2Q8NHP6 518 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PERPQ96FX8 193 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TAS2R9Q9NYW1 312 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 AJAP1Q9UKB5 411 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 NCOR2Q9Y618 2525 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 M0R3G1 203 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 AZIN1O14977 448 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 GSC2O15499 205 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PEX11AO75192 247 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 LCKP06239 509 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 C1GALT1C1LP0DN25 315 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 HTR1EP28566 365 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CSRP3P50461 194 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF84P51523 738 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 IRAK1P51617 712 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TLE4Q04727 773 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZNF169Q14929 603 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PYCR3Q53H96 274 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TEDDM1Q5T9Z0 273 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 KCTD11Q693B1 232 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 RPTNQ6XPR3 784 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 NRROSQ86YC3 692 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 NPWQ8N729 165 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPPL2AQ8TCT8 520 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ACMSDQ8TDX5 336 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 RSC1A1Q92681 617 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PTCD3Q96EY7 689 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ANKRD34BA5PLL1 514 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 EIF3FO00303 357 aaPredicted RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SAP18O00422 153 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CBX7O95931 251 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 AGR2O95994 175 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 APLNRP35414 380 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TAS2R39P59534 338 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 SHC2P98077 582 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CD47Q08722 323 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ARMC3Q5W041 872 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CWF19L1Q69YN2 538 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 TBC1D20Q96BZ9 403 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 THOC1Q96FV9 657 aaKnown RBP5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PANX1Q96RD7 426 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 EGLN1Q9GZT9 426 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 KLHL31Q9H511 634 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 OPA3Q9H6K4 179 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 CORO2BQ9UQ03 480 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 ADAM18Q9Y3Q7 739 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 GRIP1Q9Y3R0 1128 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 PKDREJQ9NTG1 2253 aa5.36□□□□□ -1.55
CDC42BPA-209ENST00000448940 MYO1CO00159 1063 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 E2F3O00716 465 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 RDH16O75452 317 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 SERPINA1P01009 418 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 SPARCP09486 303 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 EBLN1P0CF75 366 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PTPN6P29350 595 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 OASLQ15646 514 aaKnown RBP5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 MOGQ16653 247 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 DEFB121Q5J5C9 76 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 ZYG11AQ6WRX3 759 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 DDHD1Q8NEL9 900 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 MRGPRX2Q96LB1 330 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 FCRL4Q96PJ5 515 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 PLA2G3Q9NZ20 509 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 TMEM216Q9P0N5 145 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 DUSP13Q9UII6 198 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 DHRS7Q9Y394 339 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 WWP2O00308 870 aa5.35□□□□□ -1.55
CDC42BPA-209ENST00000448940 HCRTR2O43614 444 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms