RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KIAA1614Q5VZ46 1190 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 KCTD8Q6ZWB6 473 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 TRIM46Q7Z4K8 759 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 OFCC1Q8IZS5 231 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 SPARTQ8N0X7 666 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CSNK1A1LQ8N752 337 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 OR8J3Q8NGG0 315 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 EEF1AKMT1Q8WVE0 214 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC13A3Q8WWT9 602 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 NEURL2Q9BR09 285 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 GABARAPL1Q9H0R8 117 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 WASH6PQ9NQA3 447 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 AHSPQ9NZD4 102 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 DHCR7Q9UBM7 475 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 B3GNT3Q9Y2A9 372 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 FASNP49327 2511 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 KCNE1BA0A087WTH5 132 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 NPEPPSL1A6NEC2 478 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 NOBOXO60393 691 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC22A3O75751 556 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 C1QCP02747 245 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 FBLP22087 321 aaKnown RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 TGM1P22735 817 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 GSTM2P28161 218 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 FASLGP48023 281 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 BMXP51813 675 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CRYBA2P53672 197 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 EPHA4P54764 986 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 AGTRAPQ6RW13 159 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 UNC5DQ6UXZ4 953 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 PROSER1Q86XN7 944 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 KCNJ9Q92806 393 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 CHID1Q9BWS9 393 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 ALOXE3Q9BYJ1 711 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 LHPPQ9H008 270 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 PARVBQ9HBI1 364 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 AKIP1Q9NQ31 210 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 OCIAD1Q9NX40 245 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 VNN3Q9NY84 501 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 VAPAQ9P0L0 249 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 C19orf25Q9UFG5 118 aaPredicted RBP7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 PCDHGA8Q9Y5G5 932 aa7.02□□□□□ -1.29
CDC42BPA-208ENST00000442054 A0A0G2JN53 185 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 A8MUA0 341 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 SLC16A6O15403 523 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 OR10H2O60403 315 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 B4GALT2O60909 372 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 FCGR1AP12314 374 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 COX7A2P14406 83 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PSMA4P25789 261 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 CASRP41180 1078 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 SSR2P43308 183 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 RFX3P48380 749 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 CCR8P51685 355 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 NUP107P57740 925 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 IFITM3Q01628 133 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 DNASE1L3Q13609 305 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 TUBA3CQ13748 450 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 TOMM20Q15388 145 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 COL28A1Q2UY09 1125 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 RFTN2Q52LD8 501 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 LRIF1Q5T3J3 769 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 ATCAYQ86WG3 371 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 FBXO15Q8NCQ5 510 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 STARD8Q92502 1023 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 C11orf24Q96F05 449 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 TCTN2Q96GX1 697 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 RDH12Q96NR8 316 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PAIP1Q9H074 479 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 CACYBPQ9HB71 228 aaKnown RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 STARD5Q9NSY2 213 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 WDR37Q9Y2I8 494 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PRSS21Q9Y6M0 314 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 NOTCH2Q04721 2471 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 IGHV5-10-1A0A0J9YXX1 117 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 A0A1W2PQM1 296 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 SERTM1A2A2V5 107 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 ATXN7O15265 892 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 CLOCKO15516 846 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 CHRM5P08912 532 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 LIPCP11150 499 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PRPH2P23942 346 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 CCR7P32248 378 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 ALDH9A1P49189 494 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PLA2G16P53816 162 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PNLIPRP1P54315 467 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 GABARAPL2P60520 117 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 VAC14Q08AM6 782 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 TRIM40Q6P9F5 258 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 ENPP6Q6UWR7 440 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 FAM83HQ6ZRV2 1179 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 PIP4P1Q86T03 277 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 ZNF605Q86T29 641 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 CLVS1Q8IUQ0 354 aaPredicted RBP7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 DNAJB14Q8TBM8 379 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 LKAAEAR1Q8TD35 194 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 FER1L6-AS2Q96M78 137 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 MFRPQ9BY79 579 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 CLMPQ9H6B4 373 aa7.01□□□□□ -1.29
CDC42BPA-208ENST00000442054 EPS8L2Q9H6S3 715 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms