RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 SDC1P18827 310 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 CRYBA2P53672 197 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF91Q05481 1191 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 COX10Q12887 443 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 NTRK2Q16620 822 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 FAM209BQ5JX69 171 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 UNC5DQ6UXZ4 953 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 USP45Q70EL2 814 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 SYT12Q8IV01 421 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 NAGSQ8N159 534 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 CARNMT1Q8N4J0 409 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 ARRDC2Q8TBH0 407 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 NXPE2Q96DL1 559 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 TLR8Q9NR97 1041 aaKnown RBP7.13□□□□□ -1.27
CPSF6-202ENST00000435070 OR6C2Q9NZP2 312 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 FBXL21Q9UKT6 434 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 HS3ST4Q9Y661 456 aa7.13□□□□□ -1.27
CPSF6-202ENST00000435070 PIRO00625 290 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 TLX2O43763 284 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SIX6O95475 246 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PDYNP01213 254 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 IL1AP01583 271 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ALPIP09923 528 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 FAM157BP0CG42 384 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 GJA1P17302 382 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 HOXA11P31270 313 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 HNMTP50135 292 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 GDI2P50395 445 aaKnown RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MAZP56270 477 aaKnown RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MBTPS1Q14703 1052 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ZBTB6Q15916 424 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MLIPQ5VWP3 458 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 HSDL2Q6YN16 418 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF730Q6ZMV8 503 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 LSRQ86X29 649 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 KLHDC8BQ8IXV7 354 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CIDECQ96AQ7 238 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SFXN2Q96NB2 322 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 GPR63Q9BZJ6 419 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 RAB23Q9ULC3 237 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 TMEM88BA6NKF7 163 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 FAM74A7A6NL05 159 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MMP20O60882 483 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF865P0CJ78 1059 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ARL3P36405 182 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 POLR2GP62487 172 aaKnown RBP eCLIP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SV2CQ496J9 727 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 FAM74A3Q4VXF1 159 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ZNF628Q5EBL2 1059 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CDKL4Q5MAI5 379 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 LRIF1Q5T3J3 769 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SDHAF4Q5VUM1 108 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 OR7G3Q8NG95 312 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 AP3S1Q92572 193 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 DDOQ99489 341 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PKMYT1Q99640 499 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 METTL17Q9H7H0 456 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SLCO1C1Q9NYB5 712 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PGAP2Q9UHJ9 254 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 OGNP20774 298 aaKnown RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CHI3L1P36222 383 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CCR6P51684 374 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CRISP1P54107 249 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ATP12AP54707 1039 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PCDH1Q08174 1060 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CRHR2Q13324 411 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MICAQ29983 383 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SFRP5Q5T4F7 317 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 IDNKQ5T6J7 187 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PLPPR4Q7Z2D5 763 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MEX3DQ86XN8 651 aaKnown RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PTP4A1Q93096 173 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SENP5Q96HI0 755 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ART5Q96L15 291 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 NPAS1Q99742 590 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 DOHHQ9BU89 302 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CINPQ9BW66 212 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ENAMQ9NRM1 1142 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 KCTD5Q9NXV2 234 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SH3BP4Q9P0V3 963 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 KLF15Q9UIH9 416 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 NEU3Q9UQ49 428 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CCL15-CCL14A0A0B4J2E2 113 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PTP4A3O75365 173 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 GADD45GO95257 159 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 PEX11BO96011 259 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ALDOBP05062 364 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 F8A1P23610 371 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 GIFP27352 417 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 TEAD4Q15561 434 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CCL15Q16663 113 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 HSD17B12Q53GQ0 312 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 CTSL3PQ5NE16 218 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 MARCH9Q86YJ5 346 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 SLC30A8Q8IWU4 369 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 ADGRF3Q8IZF5 1079 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 BMPERQ8N8U9 685 aa7.12□□□□□ -1.27
CPSF6-202ENST00000435070 BOLLQ8N9W6 283 aaKnown RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 C11orf24Q96F05 449 aaPredicted RBP7.12□□□□□ -1.27
CPSF6-202ENST00000435070 P2RY13Q9BPV8 354 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms