RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 NCF2P19878 526 aaPredicted RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 HNRNPFP52597 415 aaKnown RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 EMP2P54851 167 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 RHAGQ02094 409 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 FOLH1Q04609 750 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 SF3A3Q12874 501 aaKnown RBP eCLIP10.34□□□□□ -0.75
CHD4-202ENST00000430771 PDE7AQ13946 482 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 ERV3-1Q14264 604 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 TGIF1Q15583 401 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 SHISA6Q6ZSJ9 500 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 VASH2Q86V25 355 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 TICAM1Q8IUC6 712 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 ANKS4BQ8N8V4 417 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 TMEM52Q8NDY8 209 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 PLPP5Q8NEB5 264 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 OR4K14Q8NGD5 310 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 ZFP28Q8NHY6 868 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 DNAJB14Q8TBM8 379 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 GFM2Q969S9 779 aaKnown RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 EXOSC8Q96B26 276 aaKnown RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 NACC2Q96BF6 587 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 TESCQ96BS2 214 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 EGLN2Q96KS0 407 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 IP6K3Q96PC2 410 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 CCT8L2Q96SF2 557 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 TMEM45AQ9NWC5 275 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 C5AR2Q9P296 337 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 BAIAP2L1Q9UHR4 511 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 ATP6V1HQ9UI12 483 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 G3BP2Q9UN86 482 aaKnown RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 ARL2BPQ9Y2Y0 163 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 GPR45Q9Y5Y3 372 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 COPG1Q9Y678 874 aaKnown RBP10.34□□□□□ -0.75
CHD4-202ENST00000430771 ZNF780BQ9Y6R6 833 aa10.34□□□□□ -0.75
CHD4-202ENST00000430771 IGKV3D-11A0A0A0MRZ8 115 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 TCRBV16S1A1N1A0A5B0 115 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 ZNF891A8MT65 544 aaPredicted RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 FAM227AF5H4B4 570 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 NDUFAB1O14561 156 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 ANKRD28O15084 1053 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 SLC22A2O15244 555 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 KLK10O43240 276 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 DYRK3O43781 588 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 OR10H2O60403 315 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 LDB3O75112 727 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 ERAL1O75616 437 aaKnown RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 CREG1O75629 220 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 SLC22A3O75751 556 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 GPR75O95800 540 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 UMODP07911 640 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 MAOAP21397 527 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 MMP11P24347 488 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 KIR3DL1P43629 444 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 RPS18P62269 152 aaKnown RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 IGLV3-21P80748 117 aaPredicted RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 SSPNQ14714 243 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 NSDHLQ15738 373 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 CPTPQ5TA50 214 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 BROXQ5VW32 411 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 LRRC69Q6ZNQ3 347 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 CAMKMTQ7Z624 323 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 ST13P4Q8IZP2 240 aaPredicted RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 MMP21Q8N119 569 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 LRRC25Q8N386 305 aaPredicted RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 KRTCAP2Q8N6L1 136 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 CCDC197Q8NCU1 140 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 ZCCHC14Q8WYQ9 949 aaKnown RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 TSLPQ969D9 159 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 NAF1Q96HR8 494 aaKnown RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 SLC45A3Q96JT2 553 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 DGAT2Q96PD7 388 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 BHLHE41Q9C0J9 482 aaPredicted RBP10.33□□□□□ -0.76
CHD4-202ENST00000430771 CLMPQ9H6B4 373 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 ADAP2Q9NPF8 381 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 SLC35C2Q9NQQ7 365 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 SH3BP4Q9P0V3 963 aa10.33□□□□□ -0.76
CHD4-202ENST00000430771 DYTNA2CJ06 578 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 PGRMC2O15173 223 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 DCTN3O75935 186 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 SLITRK5O94991 958 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 RECKO95980 971 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 IFNA16P05015 189 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 CPMP14384 443 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 CSNK2A2P19784 350 aaPredicted RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 F8A1P23610 371 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 ADSLP30566 484 aaPredicted RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 OTX2P32243 289 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 STT3AP46977 705 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 NME5P56597 212 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 KCNK10P57789 538 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 OR4D2P58180 307 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 UFM1P61960 85 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 BTG2P78543 158 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 FOXK2Q01167 660 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 ID2Q02363 134 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 SRSF11Q05519 484 aaKnown RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 EEF1A2Q05639 463 aaKnown RBP10.32□□□□□ -0.76
CHD4-202ENST00000430771 LRRC74AQ0VAA2 488 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 IL10RAQ13651 578 aa10.32□□□□□ -0.76
CHD4-202ENST00000430771 TERF2Q15554 542 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms