RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 OR4K14Q8NGD5 310 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 CLHC1Q8NHS4 586 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 GFM2Q969S9 779 aaKnown RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 ANKRD9Q96BM1 317 aaPredicted RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 PPP3R2Q96LZ3 170 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 TUBB6Q9BUF5 446 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 MED4Q9NPJ6 270 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 ZNF71Q9NQZ8 489 aaPredicted RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 BAIAP2L1Q9UHR4 511 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 RALYQ9UKM9 306 aaKnown RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 CCL27Q9Y4X3 112 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 LOC102723996A0A087X1L8 192 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 TCRBV16S1A1N1A0A5B0 115 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 BLACEA4D250 179 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 TGFBR3LH3BV60 316 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 LSM1O15116 133 aaKnown RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 AKAP10O43572 662 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 LRATO95237 230 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 CYC1P08574 325 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 ICAM2P13598 275 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 COX7A2P14406 83 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 FEN1P39748 380 aaKnown RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 XKP51811 444 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 KCNAB2Q13303 367 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 HEPACAMQ14CZ8 416 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 ZNF750Q32MQ0 723 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 NXNQ6DKJ4 435 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 OR52E8Q6IFG1 317 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 FAM47EQ6ZV65 393 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 APLFQ8IW19 511 aaPredicted RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 SCUBE1Q8IWY4 988 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 KIRREL3Q8IZU9 778 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 ARFGAP2Q8N6H7 521 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 FDCSPQ8NFU4 85 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 EXOSC8Q96B26 276 aaKnown RBP13.64□□□□□ -0.23
SGCE-204ENST00000428696 KLHL29Q96CT2 875 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 TSSK3Q96PN8 268 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 CCT7Q99832 543 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 C1orf50Q9BV19 199 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 SLC25A23Q9BV35 468 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 MIEF1Q9NQG6 463 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 GPR83Q9NYM4 423 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 PCDHA9Q9Y5H5 950 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 ZNF780BQ9Y6R6 833 aa13.64□□□□□ -0.23
SGCE-204ENST00000428696 NBEAQ8NFP9 2946 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 IGKV3D-11A0A0A0MRZ8 115 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 GOLGA8QA0A0J9YX86 632 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 C1orf226A1L170 272 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 GOLGA8OA6NCC3 632 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 C17orf105B2RV13 164 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 GOLGA8NF8WBI6 632 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 ERVH48-1M5A8F1 160 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 DYRK3O43781 588 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 SNNO75324 88 aaPredicted RBP13.63□□□□□ -0.23
SGCE-204ENST00000428696 TRA2BP62995 288 aaKnown RBP13.63□□□□□ -0.23
SGCE-204ENST00000428696 ZNF763Q0D2J5 394 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 Q0VFX4 171 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 IL23RQ5VWK5 629 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 WDR75Q8IWA0 830 aaKnown RBP13.63□□□□□ -0.23
SGCE-204ENST00000428696 SIRT6Q8N6T7 355 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 FAM76AQ8TAV0 307 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 TTC9Q92623 222 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 ABHD17AQ96GS6 310 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 OR8D2Q9GZM6 311 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 LHPPQ9H008 270 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 AKTIPQ9H8T0 292 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 KCNK13Q9HB14 408 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 SLCO1B3Q9NPD5 702 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 PTGFRNQ9P2B2 879 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 UTS2RQ9UKP6 389 aa13.63□□□□□ -0.23
SGCE-204ENST00000428696 SERPINA7P05543 415 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 PRR35P0CG20 571 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 ALOX15P16050 662 aaPredicted RBP13.62□□□□□ -0.23
SGCE-204ENST00000428696 NT5EP21589 574 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 TACR1P25103 407 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 OCRLQ01968 901 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 KIAA0040Q15053 153 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 EXT1Q16394 746 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 C6orf136Q5SQH8 315 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 VWA5B1Q5TIE3 1220 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 FCRLBQ6BAA4 426 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 GALNT18Q6P9A2 607 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 LINC00696Q6ZRV3 163 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 LIX1Q8N485 282 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 EXD3Q8N9H8 876 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 C9orf43Q8TAL5 461 aaPredicted RBP13.62□□□□□ -0.23
SGCE-204ENST00000428696 DNAJB14Q8TBM8 379 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 THAP3Q8WTV1 239 aaPredicted RBP13.62□□□□□ -0.23
SGCE-204ENST00000428696 CKAP2Q8WWK9 683 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 DAZLQ92904 295 aaKnown RBP13.62□□□□□ -0.23
SGCE-204ENST00000428696 THOC1Q96FV9 657 aaKnown RBP13.62□□□□□ -0.23
SGCE-204ENST00000428696 EGLN2Q96KS0 407 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 IMMP1LQ96LU5 166 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 WDR77Q9BQA1 342 aaPredicted RBP13.62□□□□□ -0.23
SGCE-204ENST00000428696 CNPPD1Q9BV87 410 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 WDR55Q9H6Y2 383 aaPredicted RBP13.62□□□□□ -0.23
SGCE-204ENST00000428696 ADAP2Q9NPF8 381 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 HEY2Q9UBP5 337 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 VTI1BQ9UEU0 232 aa13.62□□□□□ -0.23
SGCE-204ENST00000428696 EIF3LQ9Y262 564 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms