RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 AP1S2P56377 157 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 CDK16Q00536 496 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 SERTAD2Q14140 314 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 DHX34Q14147 1143 aaKnown RBP12.99□□□□□ -0.33
HDAC6-206ENST00000426196 SEL1L2Q5TEA6 688 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 ARMC3Q5W041 872 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 VASNQ6EMK4 673 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 SLC15A4Q8N697 577 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 C9orf106Q8NAJ2 232 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 PIK3IP1Q96FE7 263 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 ZFP3Q96NJ6 502 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF226Q9NYT6 803 aa12.99□□□□□ -0.33
HDAC6-206ENST00000426196 HAX1O00165 279 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 C1QAP02745 245 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 COX7A2P14406 83 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 NID1P14543 1247 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 HPDP32754 393 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-206ENST00000426196 SLC1A2P43004 574 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 DIO3P55073 304 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 KRTAP1-1Q07627 177 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 TBCELQ5QJ74 424 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 NXPE4Q6UWF7 544 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 KLHDC8AQ8IYD2 350 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF441Q8N8Z8 693 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 TTLQ8NG68 377 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 OR10G3Q8NGC4 313 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 CALML6Q8TD86 181 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 CCT6BQ92526 530 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF669Q96BR6 464 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-206ENST00000426196 FBXL8Q96CD0 374 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 LINGO1Q96FE5 620 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 CSF3RQ99062 836 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 RBSNQ9H1K0 784 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 PIGMQ9H3S5 423 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 COPS7BQ9H9Q2 264 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-206ENST00000426196 PROK2Q9HC23 129 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 SLC6A5Q9Y345 797 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 CHCHD2Q9Y6H1 151 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-206ENST00000426196 CR1P17927 2039 aa12.98□□□□□ -0.33
HDAC6-206ENST00000426196 DEFB108AA8MXU0 73 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 CYR61O00622 381 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 SIAH2O43255 324 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 DYRK3O43781 588 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 LRATO95237 230 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 FTCDO95954 541 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 TP53P04637 393 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-206ENST00000426196 CYP4B1P13584 511 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 TPSB2P20231 275 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 SERPINB3P29508 390 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 HNRNPH1P31943 449 aaKnown RBP12.97□□□□□ -0.33
HDAC6-206ENST00000426196 CPOXP36551 454 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 CDK9P50750 372 aaKnown RBP12.97□□□□□ -0.33
HDAC6-206ENST00000426196 LIM2P55344 173 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 SARNPP82979 210 aaKnown RBP12.97□□□□□ -0.33
HDAC6-206ENST00000426196 FOXF2Q12947 444 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 TBX2Q13207 712 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-206ENST00000426196 TPSAB1Q15661 275 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 NHSL2Q5HYW2 709 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 TRIM40Q6P9F5 258 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 LMNTD2Q8IXW0 634 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 PIAS4Q8N2W9 510 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-206ENST00000426196 MEIOBQ8N635 442 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 ZNF721Q8TF20 911 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 MS4A6EQ96DS6 147 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 WDYHV1Q96HA8 205 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 SERINC2Q96SA4 455 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 TM9SF2Q99805 663 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 UGT2B28Q9BY64 529 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 ACBD3Q9H3P7 528 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
HDAC6-206ENST00000426196 TAS2R13Q9NYV9 303 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 CNOT11Q9UKZ1 510 aaKnown RBP12.97□□□□□ -0.33
HDAC6-206ENST00000426196 DAPP1Q9UN19 280 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 KCNE2Q9Y6J6 123 aa12.97□□□□□ -0.33
HDAC6-206ENST00000426196 LDB3O75112 727 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 TRIM3O75382 744 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-206ENST00000426196 ETHE1O95571 254 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 ACSL3O95573 720 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 GUCA1CO95843 209 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 HPNP05981 417 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 FBXO45P0C2W1 286 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 CERS1P27544 350 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 MC3RP41968 323 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 MSH2P43246 934 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 PLA2G16P53816 162 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 MTTPP55157 894 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 TOMM20Q15388 145 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 PAQR3Q6TCH7 311 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 LYPD8Q6UX82 237 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 C9orf40Q8IXQ3 194 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 C7orf57Q8NEG2 295 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 ZPLD1Q8TCW7 415 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 DIO2Q92813 273 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 ABTB1Q969K4 478 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-206ENST00000426196 QRFPRQ96P65 431 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 MED18Q9BUE0 208 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 LACRTQ9GZZ8 138 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 CXorf56Q9H5V9 222 aa12.96□□□□□ -0.33
HDAC6-206ENST00000426196 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.96□□□□□ -0.332e-6■□□□□ 10.6
HDAC6-206ENST00000426196 PACSIN3Q9UKS6 424 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms