RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SASS6Q6UVJ0 657 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TMEM107Q6UX40 140 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF704Q6ZNC4 412 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF788Q6ZQV5 615 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SLC24A5Q71RS6 500 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 NDUFAF7Q7L592 441 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SCD5Q86SK9 330 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 LONP2Q86WA8 852 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TMC8Q8IU68 726 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CNGA4Q8IV77 575 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 NUDCD3Q8IVD9 361 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ADGRF4Q8IZF3 695 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF781Q8N8C0 355 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 EXD3Q8N9H8 876 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 FAM83FQ8NEG4 500 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GPRC5AQ8NFJ5 357 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 OR5T3Q8NGG3 340 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 OR2AJ1Q8NGZ0 328 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PPP4R1Q8TF05 950 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PHYHIPQ92561 330 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SNAPC3Q92966 411 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TOP1MTQ969P6 601 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 MRGPRFQ96AM1 343 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SARAFQ96BY9 339 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 R3HDM4Q96D70 268 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 FAM122AQ96E09 287 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 HPDLQ96IR7 371 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PGBD1Q96JS3 809 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 MARK4Q96L34 752 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PRMT6Q96LA8 375 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GPR137Q96N19 417 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ZNF570Q96NI8 536 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TSSK2Q96PF2 358 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PRR25Q96S07 402 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CCT8L2Q96SF2 557 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 C9orf16Q9BUW7 83 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 FNDC11Q9BVV2 318 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GSDMCQ9BYG8 508 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TPSD1Q9BZJ3 242 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 AMBRA1Q9C0C7 1298 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 STRADBQ9C0K7 418 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 DPAGT1Q9H3H5 408 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GAL3ST2Q9H3Q3 398 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SAV1Q9H4B6 383 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 DPEP3Q9H4B8 488 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ACTR5Q9H9F9 607 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ELOVL3Q9HB03 270 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CSNK1G1Q9HCP0 422 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TXLNGQ9NUQ3 528 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 TUBA8Q9NY65 449 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 RBAKQ9NYW8 714 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 MTCH1Q9NZJ7 389 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PIPOXQ9P0Z9 390 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 GAGE2DQ9UEU5 116 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ADAM28Q9UKQ2 775 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 FZD4Q9ULV1 537 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SH2B3Q9UQQ2 575 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 RUVBL2Q9Y230 463 aaKnown RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 PPIL1Q9Y3C6 166 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 RHBDD3Q9Y3P4 386 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 KLF2Q9Y5W3 355 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 SIRT4Q9Y6E7 314 aaPredicted RBP3.45□□□□□ -1.86
SF3B1-205ENST00000424674 ZHX2Q9Y6X8 837 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 CUX2O14529 1486 aa3.45□□□□□ -1.86
SF3B1-205ENST00000424674 MST1RQ04912 1400 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PPIAL4EA0A075B759 164 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TRAV24A0A0B4J272 114 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GOLGA8QA0A0J9YX86 632 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 A0A1W2PQ72 361 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 WDR91A4D1P6 747 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GOLGA8IPA6NC78 632 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 WASHC1A8K0Z3 465 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 HEPACAM2A8MVW5 462 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 F8VVB4 439 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 F8VWA3 439 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 M0QZ24 198 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 HAS3O00219 553 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 WWP2O00308 870 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 FOXE1O00358 373 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PRYO14603 147 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SLC22A2O15244 555 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TIMM8AO60220 97 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 JAK2O60674 1132 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CDC123O75794 336 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 BAG4O95429 457 aaKnown RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 H6PDO95479 791 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ZBTB11O95625 1053 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GSRP00390 522 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PGK1P00558 417 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SERPIND1P05546 499 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 RFPL3SP0C7P2 107 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 SP9P0CG40 484 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 PPIAL4FP0DN26 164 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 ENO3P13929 434 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 GP9P14770 177 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 TNNI1P19237 187 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 CD58P19256 250 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 WT1P19544 449 aaPredicted RBP3.44□□□□□ -1.86
SF3B1-205ENST00000424674 UQCRC2P22695 453 aa3.44□□□□□ -1.86
SF3B1-205ENST00000424674 FCARP24071 287 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms