RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PCBP2Q15366 365 aaKnown RBP eCLIP14.11□□□□□ -0.15
USB1-202ENST00000423271 OR4C11Q6IEV9 310 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 GTF2H2CQ6P1K8 395 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 Q6ZPB1 254 aaPredicted RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 SH2D5Q6ZV89 423 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 NCCRP1Q6ZVX7 275 aaPredicted RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 FGD2Q7Z6J4 655 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 MRGPRGQ86SM5 289 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 SPPL2CQ8IUH8 684 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 SULF2Q8IWU5 870 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 OR4N5Q8IXE1 308 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 OR14A16Q8NHC5 309 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 DAZLQ92904 295 aaKnown RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 MRPL57Q9BQC6 102 aaKnown RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 TMEM109Q9BVC6 243 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 MRPL46Q9H2W6 279 aaKnown RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 TMEM216Q9P0N5 145 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 LGALS13Q9UHV8 139 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 KLF13Q9Y2Y9 288 aaPredicted RBP14.11□□□□□ -0.15
USB1-202ENST00000423271 RNF11Q9Y3C5 154 aa14.11□□□□□ -0.15
USB1-202ENST00000423271 CREBBPQ92793 2442 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 ARHGAP10A1A4S6 786 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 WWP2O00308 870 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 PEX1O43933 1283 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 OR6B1O95007 311 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 ETHE1O95571 254 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 SBK3P0C264 359 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 TNNI3P19429 210 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 PIK3CBP42338 1070 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 PIK3CGP48736 1102 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 RAP1GDS1P52306 607 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 HK2P52789 917 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 CASP6P55212 293 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 HNRNPH2P55795 449 aaKnown RBP14.1□□□□□ -0.15
USB1-202ENST00000423271 ZNF844Q08AG5 666 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 SLAMF1Q13291 335 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 SERTAD2Q14140 314 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 CPSF6Q16630 551 aaKnown RBP eCLIP14.1□□□□□ -0.15
USB1-202ENST00000423271 LIPJQ5W064 366 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 C18orf63Q68DL7 685 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 HSDL2Q6YN16 418 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 C4orf33Q8N1A6 199 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 GHDCQ8N2G8 530 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 TMEM151AQ8N4L1 468 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 PTGR2Q8N8N7 351 aaPredicted RBP14.1□□□□□ -0.15
USB1-202ENST00000423271 MORN4Q8NDC4 146 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 SLC2A12Q8TD20 617 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 RGMAQ96B86 450 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 CDK15Q96Q40 435 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 RASL10BQ96S79 203 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 ZNF717Q9BY31 904 aaPredicted RBP14.1□□□□□ -0.15
USB1-202ENST00000423271 IPPKQ9H8X2 491 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 DEPPQ9NTK1 212 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 MYOTQ9UBF9 498 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 ADGRE2Q9UHX3 823 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 ENTPD4Q9Y227 616 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 YARS2Q9Y2Z4 477 aaKnown RBP14.1□□□□□ -0.15
USB1-202ENST00000423271 TSC22D4Q9Y3Q8 395 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 ATG4BQ9Y4P1 393 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 SPACA6W5XKT8 324 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 LRBAP50851 2863 aa14.1□□□□□ -0.15
USB1-202ENST00000423271 ZNF407Q9C0G0 2248 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 A0A0G2JMM0 328 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 A0A1W2PPB8 328 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 A0A1W2PRS3 328 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 SYNDIG1LA6NDD5 238 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 A8MVJ9 347 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 KIR3DP1A8MWS1 328 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 H0YIV9 168 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 OR7A17O14581 309 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 TFECO14948 347 aaPredicted RBP14.09□□□□□ -0.15
USB1-202ENST00000423271 CTIFO43310 598 aaKnown RBP14.09□□□□□ -0.15
USB1-202ENST00000423271 HS6ST1O60243 411 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 ZNF354AO60765 605 aaPredicted RBP14.09□□□□□ -0.15
USB1-202ENST00000423271 EEDO75530 441 aaKnown RBP14.09□□□□□ -0.15
USB1-202ENST00000423271 GSTA1P08263 222 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 ABOP16442 354 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 SOX3P41225 446 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 NEK2P51955 445 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 RNF4P78317 190 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 IGLV3-21P80748 117 aaPredicted RBP14.09□□□□□ -0.15
USB1-202ENST00000423271 TNFRSF17Q02223 184 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 ART3Q13508 389 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 KRT71Q3SY84 523 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 BEND6Q5SZJ8 279 aaPredicted RBP14.09□□□□□ -0.15
USB1-202ENST00000423271 MTFR2Q6P444 385 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 IL20RBQ6UXL0 311 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 DGAT2L6Q6ZPD8 337 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 LCA5Q86VQ0 697 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 ZCCHC7Q8N3Z6 543 aaKnown RBP14.09□□□□□ -0.15
USB1-202ENST00000423271 ZNF808Q8N4W9 903 aaPredicted RBP14.09□□□□□ -0.15
USB1-202ENST00000423271 L3MBTL4Q8NA19 623 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 POGLUT1Q8NBL1 392 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 PSD4Q8NDX1 1056 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 WDR20Q8TBZ3 569 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 ASB15Q8WXK1 588 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 ZBTB9Q96C00 473 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 PHF21BQ96EK2 531 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 ZIM3Q96PE6 472 aa14.09□□□□□ -0.15
USB1-202ENST00000423271 HPF1Q9NWY4 346 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms