RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 ZNF768Q9H5H4 540 aaKnown RBP5.64□□□□□ -1.51
HMGB3-202ENST00000419110 DCLRE1BQ9H816 532 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 SYNPO2LQ9H987 977 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 NANOGQ9H9S0 305 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 SLC35C2Q9NQQ7 365 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 ACSS1Q9NUB1 689 aaPredicted RBP5.64□□□□□ -1.51
HMGB3-202ENST00000419110 CMTM6Q9NX76 183 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 TAS2R9Q9NYW1 312 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 SLC25A37Q9NYZ2 338 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 ACTR3BQ9P1U1 418 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 STOML1Q9UBI4 398 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 ACSL6Q9UKU0 697 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 PSME2Q9UL46 239 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 DAPP1Q9UN19 280 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 ANGPT4Q9Y264 503 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 NEUROG3Q9Y4Z2 214 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 SNX8Q9Y5X2 465 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF780BQ9Y6R6 833 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 R4GN57 208 aa5.64□□□□□ -1.51
HMGB3-202ENST00000419110 KIF26BQ2KJY2 2108 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 IGHV5-51A0A0C4DH38 117 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 LY6G6EA0A0G2JKS1 128 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 DHRS12A0PJE2 317 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 LNP1A1A4G5 178 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ELOVL7A1L3X0 281 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 EME2A4GXA9 379 aaPredicted RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SYNDIG1LA6NDD5 238 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 AQP12BA6NM10 295 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 GABRR3A8MPY1 467 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 CLIC1O00299 241 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 KIF1CO43896 1103 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PRKRAO75569 313 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ERAL1O75616 437 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SLITRK5O94991 958 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ZIC2O95409 532 aaPredicted RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 NSA2O95478 260 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 B3GALT4O96024 378 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 RETP07949 1114 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MSL3P1P0C860 447 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 FCGR1AP12314 374 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 HOXB6P17509 224 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 CSNK2A2P19784 350 aaPredicted RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 EFNA1P20827 205 aaPredicted RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 FBLP22087 321 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 UQCRC2P22695 453 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PTPN6P29350 595 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PCGF2P35227 344 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MAGEA8P43361 318 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SEPHS1P49903 392 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MANFP55145 182 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 LIM2P55344 173 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SESN3P58005 492 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 HBA1P69905 142 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 OLR1P78380 273 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TXNL4AP83876 142 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 HPCAP84074 193 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PRR5P85299 388 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ACY1Q03154 408 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 VAC14Q08AM6 782 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TP53BP2Q13625 1128 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 CCNIQ14094 377 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 FAM53BQ14153 422 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MLC1Q15049 377 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 FXNQ16595 210 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PRTGQ2VWP7 1150 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 RUNDC3AQ59EK9 446 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 C4orf48Q5BLP8 95 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PERM1Q5SV97 790 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 INTS11Q5TA45 600 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TCEAL6Q6IPX3 200 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TMEM71Q6P5X7 295 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TLDC1Q6P9B6 456 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 CYP2R1Q6VVX0 501 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 GPR155Q7Z3F1 870 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SERPINA11Q86U17 422 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SLC30A8Q8IWU4 369 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 AQP12AQ8IXF9 295 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MMP21Q8N119 569 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 D2HGDHQ8N465 521 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 DNAJC22Q8N4W6 341 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ENDOVQ8N8Q3 282 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ZSCAN1Q8NBB4 408 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 GOLM1Q8NBJ4 401 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 C11orf65Q8NCR3 313 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 OR4D9Q8NGE8 314 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 OR52N2Q8NGI0 321 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 OR2I1PQ8NGU4 316 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 GOT1L1Q8NHS2 421 aaPredicted RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 PNPT1Q8TCS8 783 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ZFP90Q8TF47 636 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 TCEAL3Q969E4 200 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MIEF2Q96C03 454 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MVB12AQ96EY5 273 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 SLC41A2Q96JW4 573 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 CNDP2Q96KP4 475 aaKnown RBP5.63□□□□□ -1.51
HMGB3-202ENST00000419110 CCDC74BQ96LY2 380 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 ZNF285Q96NJ3 590 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 MS4A4EQ96PG1 132 aa5.63□□□□□ -1.51
HMGB3-202ENST00000419110 GFM1Q96RP9 751 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms