RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 PIK3R1P27986 724 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 MAPK1P28482 360 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 GALNSP34059 522 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 STT3AP46977 705 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 FOLH1Q04609 750 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 C19orf57Q0VDD7 668 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 NFATC3Q12968 1075 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 STX3Q13277 289 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 MFAP5Q13361 173 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 NR6A1Q15406 480 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 TMEM151BQ8IW70 566 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 ST13P4Q8IZP2 240 aaPredicted RBP13.7□□□□□ -0.22
LIMS1-206ENST00000414829 BRIX1Q8TDN6 353 aaKnown RBP13.7□□□□□ -0.22
LIMS1-206ENST00000414829 ZNF354BQ96LW1 612 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 PPP3R2Q96LZ3 170 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 RNF32Q9H0A6 362 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 KCNK13Q9HB14 408 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 LRTM1Q9HBL6 345 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 ZNF71Q9NQZ8 489 aaPredicted RBP13.7□□□□□ -0.22
LIMS1-206ENST00000414829 EHD3Q9NZN3 535 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 FIS1Q9Y3D6 152 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 RAP2CQ9Y3L5 183 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 DNAJC15Q9Y5T4 150 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 ZFYVE26Q68DK2 2539 aa13.7□□□□□ -0.22
LIMS1-206ENST00000414829 WDR91A4D1P6 747 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 OR2W5A6NFC9 320 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 FGF17O60258 216 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 LDB3O75112 727 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 ANXA4P09525 319 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-206ENST00000414829 SLC35E2P0CK97 266 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 TNNI3P19429 210 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 SOX11P35716 441 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 CLCN2P51788 898 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 HNRNPFP52597 415 aaKnown RBP13.69□□□□□ -0.22
LIMS1-206ENST00000414829 Q0VFX4 171 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 RAPSNQ13702 412 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 ATP6AP1LQ52LC2 224 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 C18orf63Q68DL7 685 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 SLC48A1Q6P1K1 146 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 IGFL2Q6UWQ7 119 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 TMEM52Q8NDY8 209 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 OR4K14Q8NGD5 310 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 DNAJB14Q8TBM8 379 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 C11orf24Q96F05 449 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-206ENST00000414829 APIPQ96GX9 242 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 BBC3Q96PG8 261 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-206ENST00000414829 MIEF1Q9NQG6 463 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 TEX10Q9NXF1 929 aaPredicted RBP13.69□□□□□ -0.22
LIMS1-206ENST00000414829 PCDHA9Q9Y5H5 950 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 ZNF780BQ9Y6R6 833 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 SPTA1P02549 2419 aa13.69□□□□□ -0.22
LIMS1-206ENST00000414829 C17orf105B2RV13 164 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 FCHO1O14526 889 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 SEC22BO75396 215 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 ITGAMP11215 1152 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 CHN1P15882 459 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 PCSK2P16519 638 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 SERPINB3P29508 390 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 CASRP41180 1078 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 SLC1A6P48664 564 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 MAD2L1Q13257 205 aaPredicted RBP13.68□□□□□ -0.22
LIMS1-206ENST00000414829 MPP2Q14168 576 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 MEP1AQ16819 746 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 SPRED3Q2MJR0 410 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 OR8K3Q8NH51 312 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 AGR3Q8TD06 166 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 MGARPQ8TDB4 240 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 ELP5Q8TE02 316 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 ANKRD9Q96BM1 317 aaPredicted RBP13.68□□□□□ -0.22
LIMS1-206ENST00000414829 C19orf60Q96EN9 201 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 MESP1Q9BRJ9 268 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 TNFRSF12AQ9NP84 129 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 MYNNQ9NPC7 610 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 THAP1Q9NVV9 213 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 PTGFRNQ9P2B2 879 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 HAO1Q9UJM8 370 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 ENTPD4Q9Y227 616 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 CLDN16Q9Y5I7 305 aa13.68□□□□□ -0.22
LIMS1-206ENST00000414829 UQCRHLA0A096LP55 91 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 TRBV11-1A0A0K0K1C0 115 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 B8ZZF3 427 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 SLCO1B7G3V0H7 640 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 KLF11O14901 512 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 PIP5K1BO14986 540 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 VPS4BO75351 444 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 CSNK2A2P19784 350 aaPredicted RBP13.67□□□□□ -0.22
LIMS1-206ENST00000414829 BGNP21810 368 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 RPL3P39023 403 aaKnown RBP13.67□□□□□ -0.22
LIMS1-206ENST00000414829 ASMTP46597 345 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 ALDH9A1P49189 494 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 RPL14P50914 215 aaKnown RBP13.67□□□□□ -0.22
LIMS1-206ENST00000414829 HK2P52789 917 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 ARG2P78540 354 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 BTKQ06187 659 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 TLR1Q15399 786 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 HSP90B2PQ58FF3 399 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 XKR7Q5GH72 579 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 H3F3CQ6NXT2 135 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 SCIMPQ6UWF3 145 aa13.67□□□□□ -0.22
LIMS1-206ENST00000414829 HSDL2Q6YN16 418 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms