RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 FAM71E1Q6IPT2 247 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 LRRC34Q8IZ02 419 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 OR11G2Q8NGC1 345 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 EBF4Q9BQW3 602 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 FAIM2Q9BWQ8 316 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 NPHS2Q9NP85 383 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 CES1P1Q9UKY3 287 aa28.69■■■□□ 2.18
CSNK1E-206ENST00000413574 TCRBV16S1A1N1A0A5B0 115 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 BLACEA4D250 179 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 LRATO95237 230 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 LBPP18428 481 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 DIO3P55073 304 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 ERVK-8P63133 956 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 STX4Q12846 297 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 PTGR1Q14914 329 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 RFWD2Q8NHY2 731 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 ALOXE3Q9BYJ1 711 aa28.68■■■□□ 2.18
CSNK1E-206ENST00000413574 A8MUA0 341 aa28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 CYC1P08574 325 aa28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 ACPPP15309 386 aa28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 MAPK1P28482 360 aa28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 IDH3AP50213 366 aa28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 SF3A3Q12874 501 aaKnown RBP eCLIP28.67■■■□□ 2.182e-7■■■■■ 27.2
CSNK1E-206ENST00000413574 DEFB109BQ30KR1 87 aa28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 SLC48A1Q6P1K1 146 aa28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 C19orf48Q6RUI8 117 aa28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 CPEB2Q7Z5Q1 589 aaKnown RBP28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 EIF3LQ9Y262 564 aaKnown RBP28.67■■■□□ 2.18
CSNK1E-206ENST00000413574 LOC102723996A0A087X1L8 192 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 AKAP10O43572 662 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 G6PDP11413 515 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 COX6A1P12074 109 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 HEPACAMQ14CZ8 416 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 ZNF750Q32MQ0 723 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 SFT2D3Q587I9 215 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 CGB2Q6NT52 195 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 NACC2Q96BF6 587 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 ZNF317Q96PQ6 595 aaPredicted RBP28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 NOP53Q9NZM5 478 aaKnown RBP28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 DCTN4Q9UJW0 460 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 FBXL4Q9UKA2 621 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 PKD1L2Q7Z442 2459 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 ITPR1Q14643 2758 aa28.66■■■□□ 2.18
CSNK1E-206ENST00000413574 MED13Q9UHV7 2174 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 PEX12O00623 359 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 TGDSO95455 350 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 GPR75O95800 540 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 ALDOCP09972 364 aaKnown RBP28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 DRD2P14416 443 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 GSTM5P46439 218 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 OR4D2P58180 307 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 MAD2L1Q13257 205 aaPredicted RBP28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 PCOLCEQ15113 449 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 PRSS53Q2L4Q9 553 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 SMU1Q2TAY7 513 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 NUDT8Q8WV74 236 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 THAP4Q8WY91 577 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 WDR77Q9BQA1 342 aaPredicted RBP28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 PNO1Q9NRX1 252 aaKnown RBP28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 C19orf25Q9UFG5 118 aaPredicted RBP28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 POLHQ9Y253 713 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 IGHV1-45A0A0A0MS14 117 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 ERAL1O75616 437 aaKnown RBP28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 SEC24DO94855 1032 aaPredicted RBP28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 DDCP20711 480 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 LSM12Q3MHD2 195 aaKnown RBP28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 TMEM198Q66K66 360 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 ACTRT2Q8TDY3 377 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 MAN2B2Q9Y2E5 1009 aa28.65■■■□□ 2.18
CSNK1E-206ENST00000413574 ARGFXA6NJG6 315 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 PRPS2P11908 318 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 IGLV3-21P80748 117 aaPredicted RBP28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 CHAF1BQ13112 559 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 OGFOD2Q6N063 350 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 ANKRD26P1Q6NSI1 321 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 IKBIPQ70UQ0 350 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 TICAM1Q8IUC6 712 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 OR4K14Q8NGD5 310 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 EXOSC8Q96B26 276 aaKnown RBP28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 PPWD1Q96BP3 646 aaKnown RBP28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 KLHL29Q96CT2 875 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 MARK4Q96L34 752 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 ASIC5Q9NY37 505 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 UTS2RQ9UKP6 389 aa28.64■■■□□ 2.18
CSNK1E-206ENST00000413574 IFNA16P05015 189 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 PIK3R1P27986 724 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 ACTN3Q08043 901 aaPredicted RBP28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 CPZQ66K79 652 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 KRTCAP2Q8N6L1 136 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 IP6K3Q96PC2 410 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 TRIM55Q9BYV6 548 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 ZNF700Q9H0M5 742 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 KCNK13Q9HB14 408 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 ZNF160Q9HCG1 818 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 MIEF1Q9NQG6 463 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 G3BP2Q9UN86 482 aaKnown RBP28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 WBP11Q9Y2W2 641 aaKnown RBP28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 ATMQ13315 3056 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 NBEAQ8NFP9 2946 aa28.63■■■□□ 2.17
CSNK1E-206ENST00000413574 FEN1P39748 380 aaKnown RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms