RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 TRIM25Q14258 630 aaKnown RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 MLC1Q15049 377 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 CSRP2Q16527 193 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 GLIPR1L2Q4G1C9 344 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 FBXW10Q5XX13 1052 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 TLDC1Q6P9B6 456 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 ZNF621Q6ZSS3 439 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 ZNF551Q7Z340 670 aaPredicted RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 CALHM3Q86XJ0 350 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 PTRH1Q86Y79 214 aaKnown RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 GPR135Q8IZ08 494 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 SHISA5Q8N114 240 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 C10orf111Q8N326 155 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 METTL27Q8N6F8 245 aaPredicted RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 TRIML2Q8N7C3 387 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 TMEM52Q8NDY8 209 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 BHLHE22Q8NFJ8 381 aaPredicted RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 OR10A6Q8NH74 314 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 OR5AK3PQ8NH89 298 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 ZFP28Q8NHY6 868 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 PSMA8Q8TAA3 256 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 SUN3Q8TAQ9 357 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 ADAMTS18Q8TE60 1221 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 RHBDD1Q8TEB9 315 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 ZFP90Q8TF47 636 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 OR5P2Q8WZ92 322 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 MVB12AQ96EY5 273 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 CNRIP1Q96F85 164 aaPredicted RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 AMDHD1Q96NU7 426 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 HS3ST6Q96QI5 342 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 SLC35A5Q9BS91 424 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 THUMPD3Q9BV44 507 aaKnown RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 PCDHAC1Q9H158 963 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 CHST8Q9H2A9 424 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 MUC13Q9H3R2 512 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 GLIPR2Q9H4G4 154 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 RPF2Q9H7B2 306 aaKnown RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 CXorf36Q9H7Y0 433 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 TPT1P8Q9HAU6 139 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 PARD6AQ9NPB6 346 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 FGF21Q9NSA1 209 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 SIRT3Q9NTG7 399 aaPredicted RBP6.27□□□□□ -1.41
VPS41-204ENST00000413141 CUTCQ9NTM9 273 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 GIMAP4Q9NUV9 329 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 HCN3Q9P1Z3 774 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 ACSL6Q9UKU0 697 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 PCDHGB4Q9UN71 923 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 USP22Q9UPT9 525 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 CORO2BQ9UQ03 480 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 AP3M1Q9Y2T2 418 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 RP1P56715 2156 aa6.27□□□□□ -1.41
VPS41-204ENST00000413141 CACNA1HO95180 2353 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 GOLGA4Q13439 2230 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 ASXL3Q9C0F0 2248 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 A0A1B0GX78 115 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 EVPLLA8MZ36 301 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 H0YIG0 161 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 DSCR3O14972 297 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ARPC2O15144 300 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ZNF749O43361 778 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 CHST10O43529 356 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 FGF17O60258 216 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 CBFA2T3O75081 653 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 KRT36O76013 467 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 C8orf89P0DMQ9 161 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 RNH1P13489 461 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 GPX2P18283 190 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 CSNK2A2P19784 350 aaPredicted RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 UQCRC2P22695 453 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 HTR1EP28566 365 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 TLX1P31314 330 aaPredicted RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 NBL1P41271 181 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ERFP50548 548 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 MVDP53602 400 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 MANFP55145 182 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 OR4D2P58180 307 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 FOXK1P85037 733 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 MAT1AQ00266 395 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 FOLH1Q04609 750 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ZFP36L1Q07352 338 aaKnown RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 VAC14Q08AM6 782 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ABHD18Q0P651 414 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 TRA2AQ13595 282 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS41-204ENST00000413141 SYT16Q17RD7 645 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 FAM214AQ32MH5 1076 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 ZNF750Q32MQ0 723 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 PHF19Q5T6S3 580 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 PRAMEF17Q5VTA0 474 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 SAXO2Q658L1 398 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 LCN8Q6JVE9 175 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 TMEM64Q6YI46 380 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 TTLL10Q6ZVT0 673 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 B3GNT8Q7Z7M8 397 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 SERPINA11Q86U17 422 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 IFNEQ86WN2 208 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 C10orf67Q8IYJ2 551 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 SAMD14Q8IZD0 417 aaPredicted RBP6.26□□□□□ -1.41
VPS41-204ENST00000413141 CLEC4FQ8N1N0 589 aa6.26□□□□□ -1.41
VPS41-204ENST00000413141 LRRC25Q8N386 305 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms