RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 NME7Q9Y5B8 376 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 MTAPQ13126 283 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 HAGHLQ6PII5 290 aaPredicted RBP13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC25A46Q96AG3 418 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 OR2M2Q96R28 347 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 C1QTNF3Q9BXJ4 246 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 ARL6Q9H0F7 186 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 REEP4Q9H6H4 257 aa13.3□□□□□ -0.28
CLTCL1-201ENST00000412649 CSO75390 466 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 GBAP04062 536 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 NUDT7P0C024 238 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 MTNR1AP48039 350 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 HK3P52790 923 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 PRAMEF19Q5SWL8 479 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 LRIF1Q5T3J3 769 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC27A4Q6P1M0 643 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 CYHR1Q6ZMK1 362 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 C3P1Q6ZMU1 363 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 THOC6Q86W42 341 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF614Q8N883 585 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF680Q8NEM1 530 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 NRAPQ86VF7 1730 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 SHROOM3Q8TF72 1996 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 A0A1W2PPL8 197 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 WASH4PA8MWX3 477 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 MRPL19P49406 292 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC3A1Q07837 685 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 CAMK1Q14012 370 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 ELAC1Q9H777 363 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 ACSL6Q9UKU0 697 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 H3BQ06 376 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 JUPP14923 745 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 KIR2DL3P43628 341 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 PITPNBP48739 271 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 VSX2P58304 361 aaPredicted RBP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF763Q0D2J5 394 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 NFATC2Q13469 925 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 STK11Q15831 433 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 CTSL3PQ5NE16 218 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 ZBTB37Q5TC79 503 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 LYPD8Q6UX82 237 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 TMEM17Q86X19 198 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 GPALPP1Q8IXQ4 340 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 OR52N2Q8NGI0 321 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 PARK7Q99497 189 aaKnown RBP13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 MTG2Q9H4K7 406 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 TAS2R3Q9NYW6 316 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 TBC1D24Q9ULP9 559 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 PADI2Q9Y2J8 665 aa13.29□□□□□ -0.28
CLTCL1-201ENST00000412649 H7C0S8 307 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 KDELR3O43731 214 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 ERAL1O75616 437 aaKnown RBP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 HMGN1P05114 100 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 RPLP2P05387 115 aaKnown RBP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 CKMP06732 381 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 DRD5P21918 477 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 NKX3-2P78367 333 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 GRIN2CQ14957 1233 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF311Q5JNZ3 666 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 FAHD1Q6P587 224 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SECISBP2Q96T21 854 aaKnown RBP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 C16orf70Q9BSU1 422 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 ZCCHC2Q9C0B9 1178 aaKnown RBP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 OR2AG2A6NM03 316 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 TGFB1P01137 390 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 CBLP22681 906 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 CD52P31358 61 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 RGS8P57771 180 aaPredicted RBP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 LIPJQ5W064 366 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 TRIM46Q7Z4K8 759 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 TRAPPC5Q8IUR0 188 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 TTC9Q92623 222 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 FUBP3Q96I24 572 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 EMC7Q9NPA0 242 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 CLEC2DQ9UHP7 191 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 FAM170BA6NMN3 283 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 ACADMP11310 421 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 AMD1P17707 334 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 OMPP47874 163 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 TPMTP51580 245 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 ZNF280AP59817 542 aaPredicted RBP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 RPS13P62277 151 aaKnown RBP13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SEMG2Q02383 582 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SWI5Q1ZZU3 235 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 PYHIN1Q6K0P9 492 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SMARCD3Q6STE5 483 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SHFQ7M4L6 423 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 RDH10Q8IZV5 341 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 MDGA1Q8NFP4 955 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 KAT2AQ92830 837 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 FAIM2Q9BWQ8 316 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 C12orf10Q9HB07 376 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 SLC35C2Q9NQQ7 365 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 PRKAG2Q9UGJ0 569 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 ASB1Q9Y576 335 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 KRBOX1C9JBD0 128 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 GJB3O75712 270 aa13.28□□□□□ -0.28
CLTCL1-201ENST00000412649 CLDN7O95471 211 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms