RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 POLR2IP36954 125 aaKnown RBP16.95■□□□□ 0.3
SMPD4-202ENST00000409031 GNALP38405 381 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 SELENOWP63302 87 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 COX18Q8N8Q8 333 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 PROKR1Q8TCW9 393 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 RGMAQ96B86 450 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 THAP7Q9BT49 309 aaPredicted RBP16.95■□□□□ 0.3
SMPD4-202ENST00000409031 OR10A4Q9H209 315 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 TMEM5Q9Y2B1 443 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 LOC100509620A0A075B734 347 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 LOC102723532A0A0G2JNH3 316 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 ARPC5O15511 151 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 TBX18O95935 607 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 IFNA21P01568 189 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 GKN3PP0CG01 181 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 KELP23276 732 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 ACTC1P68032 377 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 ACTA1P68133 377 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 FPGSQ05932 587 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 GK2Q14410 553 aaPredicted RBP16.95■□□□□ 0.3
SMPD4-202ENST00000409031 INAVAQ3KP66 663 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 WASH2PQ6VEQ5 465 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 OR2L2Q8NH16 312 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF563Q8TA94 476 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 TCTEX1D2Q8WW35 142 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 PTPN18Q99952 460 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 NAP1L6A6NFF2 107 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 PCDHGA12O60330 932 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 LETMD1Q6P1Q0 360 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 TMCO2Q7Z6W1 182 aaPredicted RBP16.95■□□□□ 0.3
SMPD4-202ENST00000409031 UPF1Q92900 1129 aaKnown RBP eCLIP16.95■□□□□ 0.31e-11■■■■■ 41.1
SMPD4-202ENST00000409031 HSFX1Q9UBD0 423 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 NOX1Q9Y5S8 564 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 ARFGEF2Q9Y6D5 1785 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 INPPL1O15357 1258 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 SREBF2Q12772 1141 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 PRAMEF19Q5SWL8 479 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 FAM205BPQ63HN1 556 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 PROKR2Q8NFJ6 384 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 TTLQ8NG68 377 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 OR2L3Q8NG85 312 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 RAB8BQ92930 207 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 ARMC5Q96C12 935 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 COQ8BQ96D53 544 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF300Q96RE9 604 aaPredicted RBP16.95■□□□□ 0.3
SMPD4-202ENST00000409031 TCEAL7Q9BRU2 100 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 TMEM168Q9H0V1 697 aa16.95■□□□□ 0.3
SMPD4-202ENST00000409031 LRRC37A3O60309 1634 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 STXBP1P61764 594 aaKnown RBP16.94■□□□□ 0.3
SMPD4-202ENST00000409031 PELI3Q8N2H9 469 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 DNAJC22Q8N4W6 341 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 POGLUT1Q8NBL1 392 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF514Q96K75 400 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-202ENST00000409031 UQCC2Q9BRT2 126 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 B3GNT4Q9C0J1 378 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 OR51B5Q9H339 312 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 NTN4Q9HB63 628 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 MED31Q9Y3C7 131 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF670-ZNF695F2Z2N8 137 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 ATP1B2P14415 290 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-202ENST00000409031 TIA1P31483 386 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMPD4-202ENST00000409031 GAL3ST3Q96A11 431 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 HAPLN2Q9GZV7 340 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 TAS2R8Q9NYW2 309 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 GMPR2Q9P2T1 348 aaKnown RBP16.94■□□□□ 0.3
SMPD4-202ENST00000409031 GNG8Q9UK08 70 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 F8W036 122 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 GMDSO60547 372 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 DDX6P26196 483 aaKnown RBP eCLIP16.94■□□□□ 0.32e-8■■■■■ 34.9
SMPD4-202ENST00000409031 GRK5P34947 590 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 ERVK-25P63136 954 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 BLOC1S1P78537 153 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 LRRC37A5PQ49AS3 106 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 SOCS4Q8WXH5 440 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 PMEPA1Q969W9 287 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 ISL2Q96A47 359 aa16.94■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF334Q9HCZ1 680 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-202ENST00000409031 ALDOBP05062 364 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 HLA-EP13747 358 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 GTF2F2P13984 249 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 DPP6P42658 865 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 FAM189BP81408 668 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 ZNF155Q12901 538 aaPredicted RBP16.93■□□□□ 0.3
SMPD4-202ENST00000409031 MLLT11Q13015 90 aaPredicted RBP16.93■□□□□ 0.3
SMPD4-202ENST00000409031 FGL2Q14314 439 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 ACVR1CQ8NER5 493 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 PDLIM7Q9NR12 457 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 A0A0G2JMP0 313 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 SC5DO75845 299 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 JUPP14923 745 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 ITPKBP27987 946 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 HSD17B2P37059 387 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 MMP12P39900 470 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 ZMYND11Q15326 602 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 LRIT3Q3SXY7 679 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 C14orf80Q86SX3 495 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 OR4M2Q8NGB6 313 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 OR56A1Q8NGH5 318 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 OR52N2Q8NGI0 321 aa16.93■□□□□ 0.3
SMPD4-202ENST00000409031 BBS10Q8TAM1 723 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms