RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PHF11Q9UIL8 331 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 ATG4BQ9Y4P1 393 aa14.26□□□□□ -0.13
TPM1-207ENST00000403994 TNPO3Q9Y5L0 923 aaKnown RBP14.26□□□□□ -0.13
TPM1-207ENST00000403994 DNAJC13O75165 2243 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 HS6ST1O60243 411 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 EEDO75530 441 aaKnown RBP14.25□□□□□ -0.13
TPM1-207ENST00000403994 PRF1P14222 555 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 COX7A2P14406 83 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 STT3AP46977 705 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 ARFIP1P53367 373 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 RNF4P78317 190 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 PLIN5Q00G26 463 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 FOLH1Q04609 750 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 CPSF6Q16630 551 aaKnown RBP eCLIP14.25□□□□□ -0.13
TPM1-207ENST00000403994 C18orf63Q68DL7 685 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 IL20RBQ6UXL0 311 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 TAOK1Q7L7X3 1001 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 GPR180Q86V85 440 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 OR4N5Q8IXE1 308 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 PTGR2Q8N8N7 351 aaPredicted RBP14.25□□□□□ -0.13
TPM1-207ENST00000403994 L3MBTL4Q8NA19 623 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 C16orf52Q8NHV5 167 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 WDR20Q8TBZ3 569 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 ZNF721Q8TF20 911 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 ZNF592Q92610 1267 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 DGAT2Q96PD7 388 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 PHF12Q96QT6 1004 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 TSPYL1Q9H0U9 437 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 RPF2Q9H7B2 306 aaKnown RBP14.25□□□□□ -0.13
TPM1-207ENST00000403994 MS4A12Q9NXJ0 267 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 XPR1Q9UBH6 696 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 RNF11Q9Y3C5 154 aa14.25□□□□□ -0.13
TPM1-207ENST00000403994 A0A0A6YYD5 115 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 PINLYPA6NC86 204 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 OR7A17O14581 309 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 TMPRSS11DO60235 418 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 CDC40O60508 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
TPM1-207ENST00000403994 ZNF354AO60765 605 aaPredicted RBP14.24□□□□□ -0.13
TPM1-207ENST00000403994 IGKV3-11P04433 115 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 NR2F6P10588 404 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 TNNI3P19429 210 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 AGAP20933 346 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 HTR1EP28566 365 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 BSGP35613 385 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 BUD31P41223 144 aaPredicted RBP14.24□□□□□ -0.13
TPM1-207ENST00000403994 SMSP52788 366 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 CDSNQ15517 529 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 ZNF630Q2M218 657 aaPredicted RBP14.24□□□□□ -0.13
TPM1-207ENST00000403994 SP5Q6BEB4 398 aaPredicted RBP14.24□□□□□ -0.13
TPM1-207ENST00000403994 XKRXQ6PP77 449 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 C3P1Q6ZMU1 363 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 DGAT2L6Q6ZPD8 337 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 CD163Q86VB7 1156 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 DOLPP1Q86YN1 238 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 C9orf40Q8IXQ3 194 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 MNS1Q8NEH6 495 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 OR52B6Q8NGF0 335 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 IFT81Q8WYA0 676 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 PHF21BQ96EK2 531 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 SCYL1Q96KG9 808 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 CDK15Q96Q40 435 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 PLSCR2Q9NRY7 297 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 LYARQ9NX58 379 aaKnown RBP14.24□□□□□ -0.13
TPM1-207ENST00000403994 PCTPQ9UKL6 214 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 IKBKGQ9Y6K9 419 aa14.24□□□□□ -0.13
TPM1-207ENST00000403994 EXPH5Q8NEV8 1989 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 G3V3Y1 287 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 HRKO00198 91 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 PRRG2O14669 202 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 ADAM10O14672 748 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 ALOX15P16050 662 aaPredicted RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 PTX3P26022 381 aaPredicted RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 TLX1P31314 330 aaPredicted RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 ARL1P40616 181 aaPredicted RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 SERPINB9P50453 376 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 NEK2P51955 445 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 TRAF3Q13114 568 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 CUL3Q13618 768 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 TSNAXIP1Q2TAA8 658 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 MRM1Q6IN84 353 aaKnown RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 RTL4Q6ZR62 310 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 NUDT13Q86X67 352 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 OR2M7Q8NG81 312 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 FAM57AQ8TBR7 257 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 PHF10Q8WUB8 498 aaKnown RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 DCAKDQ8WVC6 231 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 TANKQ92844 425 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 FBXL20Q96IG2 436 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 NSUN5Q96P11 429 aaKnown RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 DMRTA2Q96SC8 542 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 NOL11Q9H8H0 719 aaKnown RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 DDX31Q9H8H2 851 aaKnown RBP14.23□□□□□ -0.13
TPM1-207ENST00000403994 ZNF180Q9UJW8 692 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 PPT2Q9UMR5 302 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 ASB4Q9Y574 426 aa14.23□□□□□ -0.13
TPM1-207ENST00000403994 A0A1B0GTH9 108 aa14.22□□□□□ -0.13
TPM1-207ENST00000403994 FAM166BA8MTA8 275 aa14.22□□□□□ -0.13
TPM1-207ENST00000403994 TRIM49D1C9J1S8 452 aa14.22□□□□□ -0.13
TPM1-207ENST00000403994 E9PLN8 166 aa14.22□□□□□ -0.13
TPM1-207ENST00000403994 STX16-NPEPL1H3BU86 382 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms