RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 PHF11Q9UIL8 331 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 ZNF225Q9UK10 706 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 NPIPA1Q9UND3 350 aa14.73□□□□□ -0.05
ATG4B-203ENST00000400772 TRGV8A0A0C4DH27 118 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 HRKO00198 91 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 WWP2O00308 870 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 ZNF354AO60765 605 aaPredicted RBP14.72□□□□□ -0.05
ATG4B-203ENST00000400772 GBAP04062 536 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 FAM58BPP0C7Q3 252 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 TSPAN8P19075 237 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 CA7P43166 264 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 SSR4P51571 173 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 HK2P52789 917 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 RNF4P78317 190 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 GGTA1PQ4G0N0 100 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 FRG2Q64ET8 278 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 MILR1Q7Z6M3 343 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 CYP4Z2PQ8N1L4 340 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 FAM98AQ8NCA5 519 aaKnown RBP14.72□□□□□ -0.05
ATG4B-203ENST00000400772 OR4F6Q8NGB9 312 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 OR8K3Q8NH51 312 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 MZB1Q8WU39 189 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 TMEM125Q96AQ2 219 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 FRG2BQ96QU4 278 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 RASL10BQ96S79 203 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 SERPINI1Q99574 410 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 LYARQ9NX58 379 aaKnown RBP14.72□□□□□ -0.05
ATG4B-203ENST00000400772 ZNF835Q9Y2P0 537 aa14.72□□□□□ -0.05
ATG4B-203ENST00000400772 GLOD5A6NK44 160 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 ZNHIT1O43257 154 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 ASNA1O43681 348 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 PEX1O43933 1283 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 SLC19A2O60779 497 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 OR6B1O95007 311 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 SEMA3DO95025 777 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 IGKV3-11P04433 115 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 TLX1P31314 330 aaPredicted RBP14.71□□□□□ -0.05
ATG4B-203ENST00000400772 HSD17B3P37058 310 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 ARL1P40616 181 aaPredicted RBP14.71□□□□□ -0.05
ATG4B-203ENST00000400772 MEOX1P50221 254 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 PER3P56645 1201 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 BIKQ13323 160 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 UNC50Q53HI1 259 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 LETMD1Q6P1Q0 360 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 CHERPQ8IWX8 916 aaKnown RBP14.71□□□□□ -0.05
ATG4B-203ENST00000400772 C7orf57Q8NEG2 295 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 DOK4Q8TEW6 326 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 RBM18Q96H35 190 aaKnown RBP14.71□□□□□ -0.05
ATG4B-203ENST00000400772 SENP5Q96HI0 755 aaPredicted RBP14.71□□□□□ -0.05
ATG4B-203ENST00000400772 DGAT2Q96PD7 388 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 FARSBQ9NSD9 589 aaKnown RBP14.71□□□□□ -0.05
ATG4B-203ENST00000400772 DEPPQ9NTK1 212 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 FETUBQ9UGM5 382 aa14.71□□□□□ -0.05
ATG4B-203ENST00000400772 KLF13Q9Y2Y9 288 aaPredicted RBP14.71□□□□□ -0.05
ATG4B-203ENST00000400772 A8MVJ9 347 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 GOLGA8RI6L899 631 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 PGRMC2O15173 223 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 DLX3O60479 287 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 GPR75O95800 540 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 AIFM1O95831 613 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 ALOX15P16050 662 aaPredicted RBP14.7□□□□□ -0.06
ATG4B-203ENST00000400772 RFC3P40938 356 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 BUD31P41223 144 aaPredicted RBP14.7□□□□□ -0.06
ATG4B-203ENST00000400772 SOX3P41225 446 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 HSF1Q00613 529 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 RBPJQ06330 500 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 C3AR1Q16581 482 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.7□□□□□ -0.06
ATG4B-203ENST00000400772 SGO1Q5FBB7 561 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 TEX35Q5T0J7 233 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 TTC19Q6DKK2 380 aaPredicted RBP14.7□□□□□ -0.06
ATG4B-203ENST00000400772 CYP20A1Q6UW02 462 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 IL20RBQ6UXL0 311 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 Q6ZPB1 254 aaPredicted RBP14.7□□□□□ -0.06
ATG4B-203ENST00000400772 FGD2Q7Z6J4 655 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 NUDT13Q86X67 352 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 SPPL2CQ8IUH8 684 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 C9orf40Q8IXQ3 194 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 GPALPP1Q8IXQ4 340 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 ASB15Q8WXK1 588 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 CCDC120Q96HB5 630 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 MRPL1Q9BYD6 325 aaKnown RBP14.7□□□□□ -0.06
ATG4B-203ENST00000400772 HPF1Q9NWY4 346 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 SH3BGRL2Q9UJC5 107 aa14.7□□□□□ -0.06
ATG4B-203ENST00000400772 IQANK1A0A1B0GTG1 560 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 A0A1W2PS29 197 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 PINLYPA6NC86 204 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 KLRC4-KLRK1H3BQV0 150 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 CCL21O00585 134 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 MLYCDO95822 493 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 OTCP00480 354 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 PDYNP01213 254 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 KLK1P06870 262 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 NR2F6P10588 404 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 COX7A2P14406 83 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 ZNF24P17028 368 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 DCTP40126 519 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 GPR85P60893 370 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 HERVK_113P63132 956 aa14.69□□□□□ -0.06
ATG4B-203ENST00000400772 CLCQ05315 142 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms