RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 HSD3B1P14060 373 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 MAGEA8P43361 318 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 DIO3P55073 304 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 SERINC3Q13530 473 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 FOXR2Q6PJQ5 311 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 TIGD4Q8IY51 512 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 MAP3K3Q99759 626 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 MRM3Q9HC36 420 aaKnown RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 LMO7Q8WWI1 1683 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 AKR1C4P17516 323 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 AIMP2Q13155 320 aaKnown RBP13.2□□□□□ -0.3
VAPA-202ENST00000400000 KCNJ11Q14654 390 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 NADK2Q4G0N4 442 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 SLC39A5Q6ZMH5 540 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 MYLIPQ8WY64 445 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 ACTL8Q9H568 366 aa13.2□□□□□ -0.3
VAPA-202ENST00000400000 MPPED1O15442 326 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 EEF1E1O43324 174 aaKnown RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 AGR2O95994 175 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 SLC2A5P22732 501 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 NPRL3Q12980 569 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 UPP1Q16831 310 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 TMEM31Q5JXX7 168 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 C6orf183Q5T699 404 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 TTC9BQ8N6N2 239 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 FAM3CQ92520 227 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 SAT2Q96F10 170 aaPredicted RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 C14orf119Q9NWQ9 140 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 LGALS13Q9UHV8 139 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 GPR52Q9Y2T5 361 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 PCDHGB1Q9Y5G3 927 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 TGM5O43548 720 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 TFPTP0C1Z6 253 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 ZNF12P17014 697 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 MRPL49Q13405 166 aaKnown RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 ZNF678Q5SXM1 525 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 RFT1Q96AA3 541 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 ZNF599Q96NL3 588 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 LMAN1LQ9HAT1 526 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 POT1Q9NUX5 634 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 NLE1Q9NVX2 485 aaPredicted RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 TMEM248Q9NWD8 314 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 COL3A1P02461 1466 aaPredicted RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 NPIPA5A0A0B4J1W7 369 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 NPIPA7E9PJI5 369 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 NPIPA8P0DM63 369 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 CBSLP0DN79 551 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 ZNF30P17039 623 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 CBSP35520 551 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 GALNT1Q10472 559 aaPredicted RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 GINS1Q14691 196 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 OR5M10Q6IEU7 315 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 NCEH1Q6PIU2 408 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 MTMR14Q8NCE2 650 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 ZNF431Q8TF32 576 aaPredicted RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 THAP4Q8WY91 577 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 MAL2Q969L2 176 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 LMF1Q96S06 567 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 TAS2R10Q9NYW0 307 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 DHDHQ9UQ10 334 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 AP1M2Q9Y6Q5 423 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 ZNF705EA8MWA4 302 aaPredicted RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 ARSAP15289 507 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 EPCAMP16422 314 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 SEC23BQ15437 767 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 SAMD12Q8N8I0 201 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 SCGB1C1Q8TD33 95 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 CWH43Q9H720 699 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 TIMMDC1Q9NPL8 285 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 MKLN1Q9UL63 735 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 SLC7A11Q9UPY5 501 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 PRAMEF11O60813 436 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 APEHP13798 732 aaKnown RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 SOX3P41225 446 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 MOGSQ13724 837 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 OR52E2Q8NGJ4 325 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 TVP23AA6NH52 213 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 ZNF821O75541 412 aaPredicted RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 DLX2Q07687 328 aaPredicted RBP13.19□□□□□ -0.3
VAPA-202ENST00000400000 ALG10BQ5I7T1 473 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 HACD2Q6Y1H2 254 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 SLC7A8Q9UHI5 535 aa13.19□□□□□ -0.3
VAPA-202ENST00000400000 DISC1C4P0D8 188 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 CELP19835 753 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 ACRV1P26436 265 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 RBM34P42696 430 aaKnown RBP13.18□□□□□ -0.3
VAPA-202ENST00000400000 FXYD4P59646 89 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 HHEXQ03014 270 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 ZNF763Q0D2J5 394 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 PTP4A2Q12974 167 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 MLC1Q15049 377 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 TMEM25Q86YD3 366 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 REEP4Q9H6H4 257 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 IL23AQ9NPF7 189 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
VAPA-202ENST00000400000 PROKR1Q8TCW9 393 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms