RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 MAGP20916 626 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 NCBP2P52298 156 aaKnown RBP eCLIP14.27□□□□□ -0.124e-7■■■■□ 19.7
GPC3-202ENST00000394299 ESRRGP62508 458 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 SPIBQ01892 262 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 SYPL1Q16563 259 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 ADPRMQ3LIE5 342 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 TJAP1Q5JTD0 557 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 EOGTQ5NDL2 527 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 FBXO42Q6P3S6 717 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 CCDC80Q76M96 950 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 VN1R4Q7Z5H5 301 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 ZNF761Q86XN6 746 aaPredicted RBP14.27□□□□□ -0.12
GPC3-202ENST00000394299 FAM160A2Q8N612 972 aaPredicted RBP14.27□□□□□ -0.12
GPC3-202ENST00000394299 SLC5A8Q8N695 610 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 RNF217Q8TC41 542 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 RLN3Q8WXF3 142 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 HDAC2Q92769 488 aaKnown RBP14.27□□□□□ -0.12
GPC3-202ENST00000394299 CNRIP1Q96F85 164 aaPredicted RBP14.27□□□□□ -0.12
GPC3-202ENST00000394299 ZBED6CLQ96FA7 236 aaPredicted RBP14.27□□□□□ -0.12
GPC3-202ENST00000394299 KCNC2Q96PR1 638 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 ZNF300Q96RE9 604 aaPredicted RBP14.27□□□□□ -0.12
GPC3-202ENST00000394299 GAS2L1Q99501 681 aaPredicted RBP14.27□□□□□ -0.12
GPC3-202ENST00000394299 YTHDF1Q9BYJ9 559 aaKnown RBP14.27□□□□□ -0.12
GPC3-202ENST00000394299 SLC35C2Q9NQQ7 365 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 PCDHGB3Q9Y5G1 929 aa14.27□□□□□ -0.12
GPC3-202ENST00000394299 A6NCN8 305 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 LRRC72A6NJI9 287 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 MAN2B1O00754 1011 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 TBX19O60806 448 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 APBB3O95704 486 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 IGHV4-34P06331 123 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 HOXC4P09017 264 aaPredicted RBP14.27□□□□□ -0.13
GPC3-202ENST00000394299 TFPTP0C1Z6 253 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 POU2F1P14859 743 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 HOXB6P17509 224 aaKnown RBP14.27□□□□□ -0.13
GPC3-202ENST00000394299 GPC1P35052 558 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 BTN3A2P78410 334 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 ABATP80404 500 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.13
GPC3-202ENST00000394299 EXOC3L2Q2M3D2 409 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 XAF1Q6GPH4 301 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 REEP3Q6NUK4 255 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 ZNF773Q6PK81 442 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 RBM45Q8IUH3 476 aaKnown RBP14.27□□□□□ -0.13
GPC3-202ENST00000394299 XAGE5Q8WWM1 108 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 MAPKAP1Q9BPZ7 522 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 TMEM74BQ9NUR3 256 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 PTTG2Q9NZH5 202 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 ADAM29Q9UKF5 820 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 GMPPBQ9Y5P6 360 aa14.27□□□□□ -0.13
GPC3-202ENST00000394299 SLC1A7O00341 560 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 JRKO75564 520 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 AIFM1O95831 613 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 ITGAMP11215 1152 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 MATN1P21941 496 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 DGKEP52429 567 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 GPR18Q14330 331 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 RFX4Q33E94 735 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 ZC3H12BQ5HYM0 836 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 GPR153Q6NV75 609 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 FAHD1Q6P587 224 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 LSRQ86X29 649 aaPredicted RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 SPARTQ8N0X7 666 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 MFSD9Q8NBP5 474 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 TTLQ8NG68 377 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 OR2L5Q8NG80 312 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 OR9Q2Q8NGE9 314 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 FLVCR1-AS1Q8TAF5 88 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 LZICQ8WZA0 190 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 ISOC1Q96CN7 298 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 NIPSNAP1Q9BPW8 284 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 TRPV5Q9NQA5 729 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 OR6C2Q9NZP2 312 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 ANGPT4Q9Y264 503 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 HEBP2Q9Y5Z4 205 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 A0A0J9YVX5 310 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 OR6C74A6NCV1 312 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 FAM227AF5H4B4 570 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 MAN1A2O60476 641 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 CTSVO60911 334 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 TRMUO75648 421 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 VIPP01282 170 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 F3P13726 295 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 PVRP15151 417 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 RPP38P78345 283 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 C1orf61Q13536 156 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 TMEM35AQ53FP2 167 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 RBM48Q5RL73 367 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 CWF19L1Q69YN2 538 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 MRM1Q6IN84 353 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 PAQR7Q86WK9 346 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 TMEFF1Q8IYR6 380 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 DEFB119Q8N690 84 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 DENND6BQ8NEG7 585 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 GPR32P1Q8NGA4 272 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 SUN3Q8TAQ9 357 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 C12orf43Q96C57 262 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 TOE1Q96GM8 510 aaKnown RBP14.26□□□□□ -0.13
GPC3-202ENST00000394299 OR2A14Q96R47 310 aa14.26□□□□□ -0.13
GPC3-202ENST00000394299 BBS4Q96RK4 519 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms