RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GRK2P25098 689 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 TAS2R50P59544 299 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 FOLH1Q04609 750 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 MFAP5Q13361 173 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 SH2D4BQ5SQS7 431 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 NDUFAF5Q5TEU4 345 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 KANK2Q63ZY3 851 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 OR52E8Q6IFG1 317 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 LINC00696Q6ZRV3 163 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 GOLGA6L1Q8N7Z2 621 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 B3GNT7Q8NFL0 401 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 ELP5Q8TE02 316 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 DAZLQ92904 295 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 ARL8AQ96BM9 186 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 RBM18Q96H35 190 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 DGAT2Q96PD7 388 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 FAIM2Q9BWQ8 316 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 ZBTB20Q9HC78 741 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 SIRT5Q9NXA8 310 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 TEX10Q9NXF1 929 aaPredicted RBP17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 NKIRAS1Q9NYS0 192 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 ANAPC2Q9UJX6 822 aa17.76■□□□□ 0.43
PDLIM7-204ENST00000393546 GNG14A0A1W2PPG7 69 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 C1orf226A1L170 272 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 WASHC1A8K0Z3 465 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 TMEM114B3SHH9 223 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 PCDH7O60245 1069 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 RSL1D1O76021 490 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 HSPA4LO95757 839 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 COX7A2P14406 83 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 SOX11P35716 441 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 STT3AP46977 705 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 RAE1P78406 368 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 IGLV3-21P80748 117 aaPredicted RBP17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 ABHD17BQ5VST6 288 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 H3F3CQ6NXT2 135 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 GALNT18Q6P9A2 607 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 IGFL2Q6UWQ7 119 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 RNF165Q6ZSG1 346 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 OR14A16Q8NHC5 309 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 DNAJB14Q8TBM8 379 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 UCN3Q969E3 161 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 METTL2AQ96IZ6 378 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 ZNF354BQ96LW1 612 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 STMN3Q9NZ72 180 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 ZDHHC2Q9UIJ5 367 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 PSME2Q9UL46 239 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 PCDHA9Q9Y5H5 950 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 DNAJC15Q9Y5T4 150 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 KALRNO60229 2985 aa17.75■□□□□ 0.43
PDLIM7-204ENST00000393546 CNTRLQ7Z7A1 2325 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 DYRK3O43781 588 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 SNUPNO95149 360 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 ANXA4P09525 319 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 LINC00032P0C843 101 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 ALOX15P16050 662 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 PIK3R1P27986 724 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 TIA1P31483 386 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■□□□□ 11.1
PDLIM7-204ENST00000393546 ARRB2P32121 409 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 CLCN2P51788 898 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 ABCE1P61221 599 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 STX3Q13277 289 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 B3GNTL1Q67FW5 361 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 DDIASQ8IXT1 998 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 SLC5A8Q8N695 610 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 RBMXL3Q8N7X1 1067 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 MORN4Q8NDC4 146 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 OR4K14Q8NGD5 310 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 FAM76AQ8TAV0 307 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 AGR3Q8TD06 166 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 MGARPQ8TDB4 240 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 PTPMT1Q8WUK0 201 aaPredicted RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 TWIST2Q8WVJ9 160 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 VMP1Q96GC9 406 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 PELOQ9BRX2 385 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 MFRPQ9BY79 579 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 DEFB126Q9BYW3 111 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 PPIEQ9UNP9 301 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 CCL27Q9Y4X3 112 aa17.74■□□□□ 0.43
PDLIM7-204ENST00000393546 BOD1L1Q8NFC6 3051 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 SMG1Q96Q15 3661 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 C17orf105B2RV13 164 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 TMEM233B4DJY2 109 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 ITM2AO43736 263 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 SEC22BO75396 215 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 BGNP21810 368 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 GSTM5P46439 218 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 SLC1A6P48664 564 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 WDR4P57081 412 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 PLIN5Q00G26 463 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 MEP1AQ16819 746 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 UGT3A2Q3SY77 523 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 ATG14Q6ZNE5 492 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 ST13P4Q8IZP2 240 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 KIF2BQ8N4N8 673 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 C16orf78Q8WTQ4 265 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 NCLNQ969V3 563 aa17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 PPWD1Q96BP3 646 aaKnown RBP17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 C11orf24Q96F05 449 aaPredicted RBP17.73■□□□□ 0.43
PDLIM7-204ENST00000393546 ATP6V1G3Q96LB4 118 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms