RNA–Protein interactions for RNA: ENST00000384433.1

RNU6-549P-201, Transcript of RNA, U6 small nuclear 549, pseudogene, humanhuman

BASIC

Gene RNU6-549P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-549P-201ENST00000384433 CYCSP99999 105 aaKnown RBP3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 ITPK1Q13572 414 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 GAMTQ14353 236 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 P2RY14Q15391 338 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 MLF2Q15773 248 aaPredicted RBP3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 CCDC40Q4G0X9 1142 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 RFTN2Q52LD8 501 aaPredicted RBP3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 MPPE1Q53F39 396 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 TOR1AIP1Q5JTV8 583 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 LDLRAP1Q5SW96 308 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 BSPRYQ5W0U4 402 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 RTL6Q6ICC9 239 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 Q6ZTC4 211 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 TMEM26Q6ZUK4 368 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 OR6M1Q8NGM8 313 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 SSC4DQ8WTU2 575 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 COG3Q96JB2 828 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 RPGRIP1Q96KN7 1286 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 NSMCE2Q96MF7 247 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 SPAG8Q99932 426 aaPredicted RBP3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 PINK1Q9BXM7 581 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 BARHL1Q9BZE3 327 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 TRPV6Q9H1D0 765 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 KCNK13Q9HB14 408 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 UBE2TQ9NPD8 197 aaPredicted RBP3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 CNOT2Q9NZN8 540 aaKnown RBP3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 IL20RAQ9UHF4 553 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 TEKT2Q9UIF3 430 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 MRPS2Q9Y399 296 aaKnown RBP3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 KLF2Q9Y5W3 355 aaPredicted RBP3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 CLCA3PQ9Y6N3 262 aa3.81□□□□□ -1.8
RNU6-549P-201ENST00000384433 FGD5Q6ZNL6 1462 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 RAD54L2Q9Y4B4 1467 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ZMYM6O95789 1325 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 TRBV5-4A0A0C4DH59 114 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ARHGAP42A6NI28 874 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ZNF724A8MTY0 619 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 NME2P1O60361 137 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 CSDE1O75534 798 aaKnown RBP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 GHRP10912 638 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 CD1DP15813 335 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 NDST2P52849 883 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 RPS4XP62701 263 aaKnown RBP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 HSPA14Q0VDF9 509 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 SLC17A1Q14916 467 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ZKSCAN8Q15776 578 aaPredicted RBP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 CARTPTQ16568 116 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ZNF528Q3MIS6 628 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 MOGAT2Q3SYC2 334 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 C14orf177Q52M58 125 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 TEX35Q5T0J7 233 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 LIPKQ5VXJ0 399 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 CDC42EP5Q6NZY7 148 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 LCLAT1Q6UWP7 414 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 C3P1Q6ZMU1 363 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 Q6ZRG5 221 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 MCM10Q7L590 875 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 SLC22A16Q86VW1 577 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 C17orf64Q86WR6 236 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 KDM8Q8N371 416 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ZNRF1Q8ND25 227 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 CNNM3Q8NE01 707 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 OR10G7Q8NGN6 311 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 HCAR2Q8TDS4 363 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 PNPLA2Q96AD5 504 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 NSMCE3Q96MG7 304 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 PRICKLE1Q96MT3 831 aaPredicted RBP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 DEFB118Q96PH6 123 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ALKBH3Q96Q83 286 aaPredicted RBP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 TNFRSF13CQ96RJ3 184 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 UPF3AQ9H1J1 476 aaKnown RBP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 WDR41Q9HAD4 459 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 MDFICQ9P1T7 246 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 ISY1Q9ULR0 285 aaKnown RBP3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 PLEKHA6Q9Y2H5 1048 aa3.8□□□□□ -1.8
RNU6-549P-201ENST00000384433 CNTNAP2Q9UHC6 1331 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 IGLV7-46A0A075B6I9 117 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 LOC390937A0A1W2PQ73 354 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 RGSL1A5PLK6 1076 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 NEDD8-MDP1E9PL57 170 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 SH2D1BO14796 132 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 INPP4BO15327 924 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 SNAP91O60641 907 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 MTRF1O75570 445 aaKnown RBP3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 PROS1P07225 676 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 GNSP15586 552 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 ACADSBP45954 432 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 GSCP56915 257 aaPredicted RBP3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 POLR2FP61218 127 aaKnown RBP3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 KIAA0141Q14154 515 aaPredicted RBP3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 GCKRQ14397 625 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 TRADDQ15628 312 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 CLPPQ16740 277 aaPredicted RBP3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 MTHFSDQ2M296 383 aaKnown RBP3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 FASTKD1Q53R41 847 aaKnown RBP3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 DNAJC21Q5F1R6 531 aaKnown RBP3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 LRRC17Q8N6Y2 441 aa3.79□□□□□ -1.8
RNU6-549P-201ENST00000384433 Q8NBF4 154 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms