RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 C7orf34Q96L11 122 aa18.78■□□□□ 0.6
PDLIM5-205ENST00000380180 HSPA12BQ96MM6 686 aa18.78■□□□□ 0.6
PDLIM5-205ENST00000380180 TM9SF3Q9HD45 589 aa18.78■□□□□ 0.6
PDLIM5-205ENST00000380180 CD320Q9NPF0 282 aa18.78■□□□□ 0.6
PDLIM5-205ENST00000380180 LYARQ9NX58 379 aaKnown RBP18.78■□□□□ 0.6
PDLIM5-205ENST00000380180 TMEM131Q92545 1883 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 PCDH15Q96QU1 1955 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 MYO1GB0I1T2 1018 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 H0YGG7 62 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 C8orf89P0DMQ9 161 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 MAZP56270 477 aaKnown RBP18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 ARF3P61204 181 aaPredicted RBP18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 ADARB1P78563 741 aaKnown RBP18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 BIRC2Q13490 618 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 TP53BP2Q13625 1128 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 IQCCQ4KMZ1 466 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 CCDC116Q8IYX3 515 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 CAMKVQ8NCB2 501 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 TAMM41Q96BW9 452 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 TRAPPC9Q96Q05 1148 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 RBM4BQ9BQ04 359 aaKnown RBP18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 RBM4Q9BWF3 364 aaKnown RBP18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 PNPLA3Q9NST1 481 aa18.77■□□□□ 0.6
PDLIM5-205ENST00000380180 EME2A4GXA9 379 aaPredicted RBP18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 URADA6NGE7 173 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 ALBP02768 609 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 SMIM18P0DKX4 95 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 THRBP10828 461 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 PTGER1P34995 402 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 CLCN2P51788 898 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 PCBP3P57721 371 aaKnown RBP18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 DUSP2Q05923 314 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 SUZ12Q15022 739 aaKnown RBP18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 DEFB134Q4QY38 66 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 CRB2Q5IJ48 1285 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 HIPK1Q86Z02 1210 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 DEFB123Q8N688 67 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 ZFP28Q8NHY6 868 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 SUN3Q8TAQ9 357 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 LMX1AQ8TE12 382 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 RERGQ96A58 199 aaPredicted RBP18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 USE1Q9NZ43 259 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 ANGPT4Q9Y264 503 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 CACNA1IQ9P0X4 2223 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 A0A1W2PS29 197 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 EIF2S1P05198 315 aaKnown RBP18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 ALPPL2P10696 532 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 FEN1P39748 380 aaKnown RBP18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 ELOAQ14241 798 aaKnown RBP18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 RNF220Q5VTB9 566 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 ARMC6Q6NXE6 501 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 SHQ1Q6PI26 577 aaKnown RBP18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 SLC38A5Q8WUX1 472 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 RAB8BQ92930 207 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 ROGDIQ9GZN7 287 aa18.76■□□□□ 0.59
PDLIM5-205ENST00000380180 H0YAE9 185 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 HMGN4O00479 90 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 DCNP07585 359 aaKnown RBP18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 LINGO3P0C6S8 592 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 COL9A2Q14055 689 aaPredicted RBP18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 REEP3Q6NUK4 255 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 CEP68Q76N32 757 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 SZRD1Q7Z422 152 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 GKN2Q86XP6 184 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 SLC30A8Q8IWU4 369 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 ARL14Q8N4G2 192 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 C1orf216Q8TAB5 229 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 SPPL2AQ8TCT8 520 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 MAGED4Q96JG8 741 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 SERINC2Q96SA4 455 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 SERHL2Q9H4I8 314 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 A4GALTQ9NPC4 353 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 KCMF1Q9P0J7 381 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 IFT80Q9P2H3 777 aaPredicted RBP18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 DOLKQ9UPQ8 538 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 ENTPD4Q9Y227 616 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 PADI2Q9Y2J8 665 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 SPTBP11277 2137 aa18.75■□□□□ 0.59
PDLIM5-205ENST00000380180 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 A0A1B0GTW7 788 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 VILLO15195 856 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 DNAJB6O75190 326 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 H6PDO95479 791 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 TFPTP0C1Z6 253 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 CSNK2A2P19784 350 aaPredicted RBP18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 BCKDHBP21953 392 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 RUNX2Q13950 521 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 USP51Q70EK9 711 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 RNF44Q7L0R7 432 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 TMEFF1Q8IYR6 380 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 OFCC1Q8IZS5 231 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 KLHL6Q8WZ60 621 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 LZICQ8WZA0 190 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 BARD1Q99728 777 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 TOR3AQ9H497 397 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 ZCCHC3Q9NUD5 404 aaKnown RBP18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 ZSCAN32Q9NX65 697 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 RAB23Q9ULC3 237 aa18.74■□□□□ 0.59
PDLIM5-205ENST00000380180 MRPS2Q9Y399 296 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms