RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ERN1O75460 977 aaKnown RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 PTNP21246 168 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 C5AR1P21730 350 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 KELP23276 732 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 KIR2DL1P43626 348 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 RNF144AP50876 292 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 ADPRHP54922 357 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 EEF1A1P68104 462 aaKnown RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 EEF1A2Q05639 463 aaKnown RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TPRG1LQ5T0D9 272 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 EEF1A1P5Q5VTE0 462 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 ZDHHC21Q8IVQ6 265 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 OR8J3Q8NGG0 315 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 OMA1Q96E52 524 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF514Q96K75 400 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 SLC35A5Q9BS91 424 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 UGT2B28Q9BY64 529 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TMEM168Q9H0V1 697 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 RIBC2Q9H4K1 309 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 TBCCD1Q9NVR7 557 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 SMPD3Q9NY59 655 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-201ENST00000379433 SPHK1Q9NYA1 384 aa10.3□□□□□ -0.76
NEDD9-201ENST00000379433 H3BSA7 217 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 SCAMP2O15127 329 aaKnown RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 VEGFDO43915 354 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 BMP2P12643 396 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 ACADLP28330 430 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 IGFALSP35858 605 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 GSK3AP49840 483 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 RPS21P63220 83 aaKnown RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 RELAQ04206 551 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 NCF4Q15080 339 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 MLF2Q15773 248 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 OR7E24Q6IFN5 339 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 TMEM92Q6UXU6 159 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 WDR53Q7Z5U6 358 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 TMEFF1Q8IYR6 380 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 METTL25Q8N6Q8 603 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF597Q96LX8 424 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 RIPOR3Q96MK2 946 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 CPPED1Q9BRF8 314 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 EQTNQ9NQ60 294 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 ITM2CQ9NQX7 267 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 SPATA6Q9NWH7 488 aaPredicted RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 RAB23Q9ULC3 237 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 TESMINQ9Y4I5 508 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 PLXND1Q9Y4D7 1925 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 WDFY3Q8IZQ1 3526 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 A0A096LPI6 279 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 GSAPA4D1B5 854 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 H0YIV9 168 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 TPST2O60704 377 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 NDUFS6O75380 124 aaKnown RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 PIAS2O75928 621 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 SSR2P43308 183 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 MANFP55145 182 aaKnown RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 WNT3P56703 355 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF763Q0D2J5 394 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 EFR3AQ14156 821 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 GANABQ14697 944 aaKnown RBP10.29□□□□□ -0.76
NEDD9-201ENST00000379433 RAB30Q15771 203 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 PRSS53Q2L4Q9 553 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 TMEM52BQ4KMG9 183 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 NHSL2Q5HYW2 709 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 KRBOX4Q5JUW0 171 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 C1orf185Q5T7R7 199 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 GALNTL5Q7Z4T8 443 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 MARVELD2Q8N4S9 558 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 ZBTB44Q8NCP5 570 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 ZCCHC10Q8TBK6 192 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 HDAC8Q9BY41 377 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 SLC6A16Q9GZN6 736 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 RASSF1Q9NS23 344 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 SELENONQ9NZV5 590 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 CYP8B1Q9UNU6 501 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 MYRFQ9Y2G1 1151 aa10.29□□□□□ -0.76
NEDD9-201ENST00000379433 ZNF860A6NHJ4 632 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 SHOXO15266 292 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 NDUFS4O43181 175 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 GPC1P35052 558 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 DPTQ07507 201 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 GGTA1PQ4G0N0 100 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 RPS26P11Q5JNZ5 115 aaPredicted RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 HORMAD1Q86X24 394 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 PTRH1Q86Y79 214 aaKnown RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 ATG16L2Q8NAA4 619 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 OR5K2Q8NHB8 316 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 C16orf78Q8WTQ4 265 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 DCUN1D5Q9BTE7 237 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 EFCAB11Q9BUY7 163 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 TOR3AQ9H497 397 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 KLHL31Q9H511 634 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 C2orf42Q9NWW7 574 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 TEX10Q9NXF1 929 aaPredicted RBP10.28□□□□□ -0.76
NEDD9-201ENST00000379433 KIF17Q9P2E2 1029 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 TBC1D29Q9UFV1 150 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 CD207Q9UJ71 328 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 DOLKQ9UPQ8 538 aa10.28□□□□□ -0.76
NEDD9-201ENST00000379433 SPAG17Q6Q759 2223 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms