RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 PDLIM5Q96HC4 596 aaKnown RBP16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 ZFP64Q9NPA5 681 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 CORO1CQ9ULV4 474 aaPredicted RBP16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 KIAA1549Q9HCM3 1950 aa16.37■□□□□ 0.21
PDLIM4-202ENST00000379018 FAM95CA0A1B0GW59 222 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 SYNDIG1LA6NDD5 238 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 LRRC3CA6NJW4 275 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 TRAPPC6AO75865 159 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 CPN2P22792 545 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 CDC25BP30305 580 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 HPDP32754 393 aaPredicted RBP16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 MSH2P43246 934 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 SLC6A12P48065 614 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 HNMTP50135 292 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 ZNF791Q3KP31 576 aaPredicted RBP16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 ACSF3Q4G176 576 aaPredicted RBP16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 ADGRD1Q6QNK2 874 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 CLEC9AQ6UXN8 241 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 ZNF793Q6ZN11 406 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 CHSY3Q70JA7 882 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 GALNT7Q86SF2 657 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 ADAMTSL2Q86TH1 951 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 NKAPQ8N5F7 415 aaKnown RBP16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 OR10G3Q8NGC4 313 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 PPWD1Q96BP3 646 aaKnown RBP16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 RHBDF1Q96CC6 855 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 C18orf12Q96KH6 178 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 DGAT2Q96PD7 388 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 YIPF4Q9BSR8 244 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 DOHHQ9BU89 302 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 EPB41L4BQ9H329 900 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 PRDM7Q9NQW5 492 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 PSAT1Q9Y617 370 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 SPACA6W5XKT8 324 aa16.36■□□□□ 0.21
PDLIM4-202ENST00000379018 HRKO00198 91 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 SAP18O00422 153 aaKnown RBP16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 FGF17O60258 216 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 INHBBP09529 407 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 GSTM2P28161 218 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 ELK3P41970 407 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 KCNC1P48547 511 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 CDKL1Q00532 357 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 PCBP2Q15366 365 aaKnown RBP eCLIP16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 CYP1B1Q16678 543 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 MPEG1Q2M385 716 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 ADPRMQ3LIE5 342 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 RASGEF1CQ8N431 466 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 SPATA6LQ8N4H0 392 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 PAQR8Q8TEZ7 354 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 ANKRD49Q8WVL7 239 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 ANKRD9Q96BM1 317 aaPredicted RBP16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 SENP5Q96HI0 755 aaPredicted RBP16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 KCNC2Q96PR1 638 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 TMEM79Q9BSE2 394 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 ZNF395Q9H8N7 513 aaPredicted RBP16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 PLAC1Q9HBJ0 212 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 NEUROD4Q9HD90 331 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 DNAJC11Q9NVH1 559 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 CAMK2AQ9UQM7 478 aa16.35■□□□□ 0.21
PDLIM4-202ENST00000379018 PGRMC1O00264 195 aaKnown RBP16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 DNALI1O14645 258 aaPredicted RBP16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 DYRK3O43781 588 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 PRAMEF4O60810 478 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 IL2RAP01589 272 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 PCNAP12004 261 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 HSPA7P48741 367 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 ZNF136P52737 540 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 TAS2R39P59534 338 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 DUSP8Q13202 625 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 DOC2AQ14183 400 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 TOMM20Q15388 145 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 PRAMEF9Q5VWM5 478 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 DGAT2L6Q6ZPD8 337 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 MAATS1Q7Z4T9 603 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 GAS2L3Q86XJ1 694 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 LRRC25Q8N386 305 aaPredicted RBP16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 ACOT4Q8N9L9 421 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 NUBPLQ8TB37 319 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 EXT2Q93063 718 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 KRT12Q99456 494 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 NAT9Q9BTE0 207 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 SORBS1Q9BX66 1292 aaKnown RBP16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 NT5DC2Q9H857 520 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 PROK2Q9HC23 129 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 LYRM4Q9HD34 91 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 SH2D2AQ9NP31 389 aa16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 ZNF490Q9ULM2 529 aaPredicted RBP16.34■□□□□ 0.21
PDLIM4-202ENST00000379018 CLCA1A8K7I4 914 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 PRKRAO75569 313 aaKnown RBP16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 EPXP11678 715 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 ATP5A1P25705 553 aaKnown RBP16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 SSR2P43308 183 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 DCAF7P61962 342 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 DAZAP2Q15038 168 aaPredicted RBP16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 TGFBIQ15582 683 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 LYPD8Q6UX82 237 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 TMEM64Q6YI46 380 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 UBE3DQ7Z6J8 389 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 LACC1Q8IV20 430 aa16.33■□□□□ 0.2
PDLIM4-202ENST00000379018 ANKMY2Q8IV38 441 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms