RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 PCDHGB1Q9Y5G3 927 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 C2orf92A0A1B0GVN3 265 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 ZNF821O75541 412 aaPredicted RBP16.09■□□□□ 0.17
VARS-215ENST00000375663 RCBTB2O95199 551 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 PLAG1Q6DJT9 500 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 TMC8Q8IU68 726 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 TRAM1L1Q8N609 369 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 OR56A1Q8NGH5 318 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 WFIKKN2Q8TEU8 576 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 TRIB2Q92519 343 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 HDHD5Q9BXW7 423 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 TMEM30AQ9NV96 361 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 NLKQ9UBE8 527 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 SLC31A1O15431 190 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 ARL6IP5O75915 188 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 GABARAPO95166 117 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 SOD2P04179 222 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 OSMP13725 252 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 IGFBP6P24592 240 aaPredicted RBP16.09■□□□□ 0.17
VARS-215ENST00000375663 CLLU1OSQ5K130 101 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 ZNF613Q6PF04 617 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 PAMR1Q6UXH9 720 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 ZNF551Q7Z340 670 aaPredicted RBP16.09■□□□□ 0.17
VARS-215ENST00000375663 F2RL3Q96RI0 385 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 GABRQQ9UN88 632 aa16.09■□□□□ 0.17
VARS-215ENST00000375663 CTDSP2O14595 271 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 CD1EP15812 388 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 DAPP51397 102 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 TIGD4Q8IY51 512 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 CBARPQ8N350 705 aaPredicted RBP16.08■□□□□ 0.17
VARS-215ENST00000375663 OR4K5Q8NGD3 323 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 ZNF563Q8TA94 476 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 SOHLH2Q9NX45 425 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 ZSCAN32Q9NX65 697 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 STOX2Q9P2F5 926 aaPredicted RBP16.08■□□□□ 0.17
VARS-215ENST00000375663 FKBP7Q9Y680 259 aa16.08■□□□□ 0.17
VARS-215ENST00000375663 ANHXE9PGG2 379 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 ACVR2AP27037 513 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 PTGES3Q15185 160 aaKnown RBP16.08■□□□□ 0.16
VARS-215ENST00000375663 XKRXQ6PP77 449 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 GDPGP1Q6ZNW5 385 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 AMIGO1Q86WK6 493 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 PARP16Q8N5Y8 322 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 KLHDC9Q8NEP7 349 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 NUDT8Q8WV74 236 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 RAB11FIP5Q9BXF6 653 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 ABCG5Q9H222 651 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 NUFIP1Q9UHK0 495 aaKnown RBP16.08■□□□□ 0.16
VARS-215ENST00000375663 BTNL2Q9UIR0 455 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 PROM1O43490 865 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 DDX6P26196 483 aaKnown RBP eCLIP16.08■□□□□ 0.162e-7■□□□□ 10.3
VARS-215ENST00000375663 ERP29P30040 261 aaKnown RBP16.08■□□□□ 0.16
VARS-215ENST00000375663 MAT2AP31153 395 aaKnown RBP16.08■□□□□ 0.16
VARS-215ENST00000375663 SOX3P41225 446 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 UGT3A2Q3SY77 523 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 AGAP6Q5VW22 663 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 GRHL2Q6ISB3 625 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 POMZP3Q6PJE2 187 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 CCDC116Q8IYX3 515 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 RNF175Q8N4F7 328 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 AGAP4Q96P64 663 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 FUZQ9BT04 418 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 SLC2A11Q9BYW1 496 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 WDR45Q9Y484 360 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 ANXA2P2A6NMY6 339 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 ANXA2P07355 339 aaKnown RBP16.08■□□□□ 0.16
VARS-215ENST00000375663 ZNF3P17036 446 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 CCR7P32248 378 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 GSTM4Q03013 218 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 AKIRIN2Q53H80 203 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 CCDC28AQ8IWP9 274 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 IQCF1Q8N6M8 205 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 TSEN15Q8WW01 171 aaKnown RBP16.08■□□□□ 0.16
VARS-215ENST00000375663 AKAP1Q92667 903 aaKnown RBP eCLIP16.08■□□□□ 0.16
VARS-215ENST00000375663 RBM18Q96H35 190 aaKnown RBP16.08■□□□□ 0.16
VARS-215ENST00000375663 WDR26Q9H7D7 661 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 CDH7Q9ULB5 785 aa16.08■□□□□ 0.16
VARS-215ENST00000375663 CDK5RAP2Q96SN8 1893 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 SLC16A6O15403 523 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 CD70P32970 193 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 IRF5Q13568 498 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 DTX3Q8N9I9 347 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 GNPDA2Q8TDQ7 276 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 C16orf78Q8WTQ4 265 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 RFT1Q96AA3 541 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 GABRR3A8MPY1 467 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 RPL6Q02878 288 aaKnown RBP16.07■□□□□ 0.16
VARS-215ENST00000375663 ZNF33BQ06732 778 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 ADPRMQ3LIE5 342 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 XKR7Q5GH72 579 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 AGAP7PQ5VUJ5 663 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 NADSYN1Q6IA69 706 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 SBSNQ6UWP8 590 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 DLEU7Q6UYE1 221 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 GRHL3Q8TE85 626 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 GGHQ92820 318 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 RIPOR3Q96MK2 946 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 GAL3ST1Q99999 423 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 KCNK12Q9HB15 430 aa16.07■□□□□ 0.16
VARS-215ENST00000375663 MAZP56270 477 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms