RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 NFATC2Q13469 925 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 GTF2H2Q13888 395 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 TRIP6Q15654 476 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 PTCHD3Q3KNS1 767 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 AASDHQ4L235 1098 aaPredicted RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 ATP6AP1LQ52LC2 224 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 PAGE3Q5JUK9 113 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 SPOUT1Q5T280 376 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 C6orf52Q5T4I8 152 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 GPRC6AQ5T6X5 926 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ZDHHC20Q5W0Z9 365 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 FAM219BQ5XKK7 198 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 SULT1C3Q6IMI6 304 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 GTF2H2CQ6P1K8 395 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 FAM151BQ6UXP7 276 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 SLC39A5Q6ZMH5 540 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ZNF813Q6ZN06 617 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 Q6ZSR9 355 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 PTCHD4Q6ZW05 846 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 BCDIN3DQ7Z5W3 292 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 DEFB128Q7Z7B8 93 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 TMC8Q8IU68 726 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 CAMK1DQ8IU85 385 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 APCDD1Q8J025 514 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 SFRP1Q8N474 314 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ARL14EPQ8N8R7 260 aaPredicted RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 FNDC5Q8NAU1 212 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 TRPV3Q8NET8 790 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 OR2AP1Q8NGE2 309 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 OR52B6Q8NGF0 335 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 OR56A3Q8NH54 315 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 FIBINQ8TAL6 211 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 DNAJB14Q8TBM8 379 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 METTL6Q8TCB7 284 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 LKAAEAR1Q8TD35 194 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ADAMTS18Q8TE60 1221 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 NAT14Q8WUY8 206 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 CANT1Q8WVQ1 401 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 MRPS31Q92665 395 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 ULK4Q96C45 1275 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ECHDC3Q96DC8 303 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 LMLNQ96KR4 655 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 PPP3R2Q96LZ3 170 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 CCDC115Q96NT0 180 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 DEFB118Q96PH6 123 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 MCCC1Q96RQ3 725 aaPredicted RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 KCTD14Q9BQ13 255 aaPredicted RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 TMEM79Q9BSE2 394 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 C9orf16Q9BUW7 83 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 APOL5Q9BWW9 433 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ANKRD60Q9BZ19 345 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 TM6SF2Q9BZW4 377 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 TRIM4Q9C037 500 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 RBM38Q9H0Z9 239 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 ZBP1Q9H171 429 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ACTL8Q9H568 366 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ASB8Q9H765 288 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 NOL11Q9H8H0 719 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 VCX3AQ9NNX9 186 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 IL26Q9NPH9 171 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 PAPOLBQ9NRJ5 636 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 MRPL17Q9NRX2 175 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 AGPAT4Q9NRZ5 378 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 PNPLA3Q9NST1 481 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 ABCB8Q9NUT2 735 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 DUS2Q9NX74 493 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 SPG21Q9NZD8 308 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 CRLS1Q9UJA2 301 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 PTBP2Q9UKA9 531 aaKnown RBP4.6□□□□□ -1.67
USP48-202ENST00000374730 HS3ST2Q9Y278 367 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 PPIL1Q9Y3C6 166 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 CCL27Q9Y4X3 112 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 TIMM22Q9Y584 194 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 DENND4AQ7Z401 1863 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 DOCK6Q96HP0 2047 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 NOTCH4Q99466 2003 aa4.6□□□□□ -1.67
USP48-202ENST00000374730 IGLV3-16A0A075B6K0 115 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TRIM64A6NGJ6 449 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TRIM64CA6NLI5 447 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ENO4A6NNW6 628 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 IQCF5A8MTL0 148 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 C9JVG2 144 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 PYCARD-AS1I3L0S3 204 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 K7EPI3 171 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 K7ERQ8 282 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 SLC28A1O00337 649 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TEX28O15482 410 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 SMAD6O43541 496 aaKnown RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 RGS14O43566 566 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TULP3O75386 442 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 TIPRLO75663 272 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 BAIAP3O94812 1187 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CSPG5O95196 566 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 SLC25A14O95258 325 aaPredicted RBP4.59□□□□□ -1.67
USP48-202ENST00000374730 CLDN7O95471 211 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 IGKV2-30P06310 120 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 MPC1LP0DKB6 136 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 CTSAP10619 480 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 SRCP12931 536 aa4.59□□□□□ -1.67
USP48-202ENST00000374730 ZNF23P17027 643 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms