RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 EEFSECP57772 596 aaKnown RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 SPCS3P61009 180 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 IRF9Q00978 393 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 NRG1Q02297 640 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 MBTPS1Q14703 1052 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 TBCEQ15813 527 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 TIGD6Q17RP2 521 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 COQ5Q5HYK3 327 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 PCID2Q5JVF3 399 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 CAPN13Q6MZZ7 669 aaPredicted RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 USP53Q70EK8 1073 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 SLC16A13Q7RTY0 426 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 MON1AQ86VX9 555 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 MCATQ8IVS2 390 aaKnown RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 RTL3Q8N8U3 475 aaKnown RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 ACVR1CQ8NER5 493 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 GPR151Q8TDV0 419 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 LRRC58Q96CX6 371 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 PPP3R2Q96LZ3 170 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 TBL1YQ9BQ87 522 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 RHNO1Q9BSD3 238 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 MARVELD1Q9BSK0 173 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 CPEB1Q9BZB8 566 aaKnown RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 BTBD1Q9H0C5 482 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 LMAN2LQ9H0V9 348 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 OR51E2Q9H255 320 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 MS4A5Q9H3V2 200 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 ZNF768Q9H5H4 540 aaKnown RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 IL1RL2Q9HB29 575 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 NIT2Q9NQR4 276 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 SMPD4Q9NXE4 827 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 RNF186Q9NXI6 227 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 MPP6Q9NZW5 540 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 SCML2Q9UQR0 700 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 RUVBL2Q9Y230 463 aaKnown RBP8.46□□□□□ -1.06
ATG4A-203ENST00000372232 DYRK1BQ9Y463 629 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 PCDHGC4Q9Y5F7 938 aa8.46□□□□□ -1.06
ATG4A-203ENST00000372232 LOC100506127A0A0U1RQW1 187 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 TMEM189-UBE2V1I3L0A0 370 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 TERTO14746 1132 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ANKRD28O15084 1053 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ORC5O43913 435 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 FAM20BO75063 409 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 GPX5O75715 221 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 MOCS2O96007 188 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 KLK3P07288 261 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ZNF806P0C7X5 589 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 HOXB8P17481 243 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ADRA1AP35348 466 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 CSRP3P50461 194 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 CLCN7P51798 805 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 PGDP52209 483 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 SCAND1P57086 179 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 YBX1P67809 324 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 FAM189BP81408 668 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 KEAP1Q14145 624 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 CAPRIN1Q14444 709 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 USP10Q14694 798 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 UGT3A2Q3SY77 523 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 SOWAHCQ53LP3 525 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 NOMO2Q5JPE7 1267 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 NHLRC3Q5JS37 347 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 SDHAF4Q5VUM1 108 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 KLHL17Q6TDP4 642 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 IGF2-ASQ6U949 168 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 KRT78Q8N1N4 520 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 NKAPQ8N5F7 415 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 PPHLN1Q8NEY8 458 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 IPMKQ8NFU5 416 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 OR11H4Q8NGC9 324 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 FBXO30Q8TB52 745 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 BAHD1Q8TBE0 780 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ELP5Q8TE02 316 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ASZ1Q8WWH4 475 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 LINC01599Q8WXQ3 324 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 HS6ST2Q96MM7 605 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 GPR22Q99680 433 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 TREX2Q9BQ50 279 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ZNF436Q9C0F3 470 aaPredicted RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 GALNT9Q9HCQ5 603 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 RBM22Q9NW64 420 aaKnown RBP eCLIP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 DNAJB12Q9NXW2 375 aaKnown RBP8.45□□□□□ -1.06
ATG4A-203ENST00000372232 NSMCE4AQ9NXX6 385 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 DNAJB9Q9UBS3 223 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 KLK4Q9Y5K2 254 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 PIAS3Q9Y6X2 628 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 BPTFQ12830 3046 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 A0A1W2PRQ8 180 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 AIPO00170 330 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 CHP2O43745 196 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 APBB3O95704 486 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 RLN2P04090 185 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 HLA-DQB2P05538 268 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 URODP06132 367 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ACTR1BP42025 376 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 ASMTP46597 345 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 OR1G1P47890 313 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 GPR15P49685 360 aa8.45□□□□□ -1.06
ATG4A-203ENST00000372232 GEMP55040 296 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms