RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 Q6ZSR6 202 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 PPP1R3BQ86XI6 285 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 FUNDC1Q8IVP5 155 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 GLB1L2Q8IW92 636 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 OR9I1Q8NGQ6 314 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 GTPBP2Q9BX10 602 aaKnown RBP8.34□□□□□ -1.07
TPM3-213ENST00000368545 TPSD1Q9BZJ3 242 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 EBF2Q9HAK2 575 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 IMP3Q9NV31 184 aaKnown RBP8.34□□□□□ -1.07
TPM3-213ENST00000368545 C2orf42Q9NWW7 574 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 CA5BQ9Y2D0 317 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.34□□□□□ -1.07
TPM3-213ENST00000368545 TSC22D4Q9Y3Q8 395 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 POLR3HQ9Y535 204 aaPredicted RBP8.34□□□□□ -1.07
TPM3-213ENST00000368545 EML5Q05BV3 1969 aa8.34□□□□□ -1.07
TPM3-213ENST00000368545 PCDH15Q96QU1 1955 aa8.34□□□□□ -1.08
TPM3-213ENST00000368545 AQP12BA6NM10 295 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 MRASO14807 208 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ANGPT2O15123 496 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 C1GALT1C1LP0DN25 315 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 MTHFD1P11586 935 aaKnown RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 PRPS2P11908 318 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 PKLRP30613 574 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 RAB28P51157 221 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 RPS16P62249 146 aaKnown RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 HMGCS1Q01581 520 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 FOXO1Q12778 655 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ILF3Q12906 894 aaKnown RBP eCLIP8.33□□□□□ -1.08
TPM3-213ENST00000368545 PRKG2Q13237 762 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ILKQ13418 452 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 TSTA3Q13630 321 aaPredicted RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 CLCA4Q14CN2 919 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 TRMT5Q32P41 509 aaKnown RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 RFTN2Q52LD8 501 aaPredicted RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 IL23RQ5VWK5 629 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ICE2Q659A1 982 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 SUSD1Q6UWL2 747 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ABRAXAS1Q6UWZ7 409 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 NET1Q7Z628 596 aaPredicted RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 C17orf64Q86WR6 236 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 LAS2Q8IYD9 372 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ZNF248Q8NDW4 579 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 CADM4Q8NFZ8 388 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 SPDL1Q96EA4 605 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 CAMK1GQ96NX5 476 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ZBTB18Q99592 522 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 SOX7Q9BT81 388 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 CENPOQ9BU64 300 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 WDR41Q9HAD4 459 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 PELI2Q9HAT8 420 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 NMRK1Q9NWW6 199 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 MAN2B2Q9Y2E5 1009 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 CEP192Q8TEP8 1941 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ZFYVE26Q68DK2 2539 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 FOXE1O00358 373 aaPredicted RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 SYT5O00445 386 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 FBP2O00757 339 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 TNFP01375 233 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 G6PDP11413 515 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 CXCR2P25025 360 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ACTR1BP42025 376 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 POLR2JP52435 117 aaKnown RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 ACTR1AP61163 376 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 RPE65Q16518 533 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 TIGD6Q17RP2 521 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ALG11Q2TAA5 492 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 LIN54Q6MZP7 749 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 DUS1LQ6P1R4 473 aaKnown RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 GALNT18Q6P9A2 607 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 FBXW8Q8N3Y1 598 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 OR7G3Q8NG95 312 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 OR2L8Q8NGY9 312 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 PROKR1Q8TCW9 393 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 SNX19Q92543 992 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 SH3KBP1Q96B97 665 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 ZNF578Q96N58 590 aaPredicted RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 IL17FQ96PD4 163 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 SERINC2Q96SA4 455 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 NPAS2Q99743 824 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 GSDMCQ9BYG8 508 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 KIR3DX1Q9H7L2 352 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 GID8Q9NWU2 228 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 VPS29Q9UBQ0 182 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 LEF1Q9UJU2 399 aaPredicted RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 PLAGL1Q9UM63 463 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 PLEKHM1Q9Y4G2 1056 aa8.33□□□□□ -1.08
TPM3-213ENST00000368545 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.33□□□□□ -1.08
TPM3-213ENST00000368545 CNOT1A5YKK6 2376 aaKnown RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 SPTY2D1-AS1A0A0U1RR47 76 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 A0A1W2PP18 115 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 PIPSLA2A3N6 862 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 CLEC18AA5D8T8 446 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 PATE3B3GLJ2 98 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 EEDO75530 441 aaKnown RBP8.32□□□□□ -1.08
TPM3-213ENST00000368545 ATP6V1G2O95670 118 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 NPPAP01160 153 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 THEGLP0DJG4 465 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 AMD1P17707 334 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 MALP21145 153 aa8.32□□□□□ -1.08
TPM3-213ENST00000368545 SERPINB1P30740 379 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms