RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SOX11P35716 441 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 RAB28P51157 221 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 LAPTM5Q13571 262 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 PGS1Q32NB8 556 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 RABL3Q5HYI8 236 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 COQ5Q5HYK3 327 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 CRB2Q5IJ48 1285 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 SAMD4BQ5PRF9 694 aaKnown RBP9.42□□□□□ -0.9
TPM3-210ENST00000368530 ZNF385CQ66K41 422 aaPredicted RBP9.42□□□□□ -0.9
TPM3-210ENST00000368530 SLC6A19Q695T7 634 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 PRMT9Q6P2P2 845 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 FAM198BQ6UWH4 519 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 DNAJC14Q6Y2X3 702 aaPredicted RBP9.42□□□□□ -0.9
TPM3-210ENST00000368530 ADCK2Q7Z695 626 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 TMEM126BQ8IUX1 230 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 FAM20CQ8IXL6 584 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 KRT78Q8N1N4 520 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 BHLHE22Q8NFJ8 381 aaPredicted RBP9.42□□□□□ -0.9
TPM3-210ENST00000368530 OR1L3Q8NH93 324 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 SLC13A3Q8WWT9 602 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 SMAD5Q99717 465 aaKnown RBP9.42□□□□□ -0.9
TPM3-210ENST00000368530 HOPXQ9BPY8 73 aaPredicted RBP9.42□□□□□ -0.9
TPM3-210ENST00000368530 GPATCH1Q9BRR8 931 aaKnown RBP9.42□□□□□ -0.9
TPM3-210ENST00000368530 PCDHAC1Q9H158 963 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 OR51B5Q9H339 312 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 EHD1Q9H4M9 534 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 MVB12BQ9H7P6 319 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 DMRT3Q9NQL9 472 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 TMEM45AQ9NWC5 275 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 CMTM6Q9NX76 183 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 LUZP4Q9P127 313 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 POMT2Q9UKY4 750 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 PPT2Q9UMR5 302 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 ICKQ9UPZ9 632 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 TMED5Q9Y3A6 229 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 ZNF451Q9Y4E5 1061 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 LRBAP50851 2863 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 HIVEP3Q5T1R4 2406 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 CRYBG3Q68DQ2 2970 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 ESPL1Q14674 2120 aa9.42□□□□□ -0.9
TPM3-210ENST00000368530 A1L4Q6 167 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SLC9B1P1A6NJY1 282 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 H3BMH7 237 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 H7BY64 318 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 DNAJA2O60884 412 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 KLF7O75840 302 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 MYO1DO94832 1006 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 DDAH2O95865 285 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 B3GALT4O96024 378 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 KLK3P07288 261 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 HSD3B1P14060 373 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ANPEPP15144 967 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SLC6A2P23975 617 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 HSD3B2P26439 372 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 S100A3P33764 101 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ARL4DP49703 201 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 CLNS1AP54105 237 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 CLDN8P56748 225 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 AP2B1P63010 937 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 RAE1P78406 368 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 ZNF33BQ06732 778 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 E2F2Q14209 437 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PLCL1Q15111 1095 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PLEKHN1Q494U1 663 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 C6orf10Q5SRN2 563 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ZNF787Q6DD87 383 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 TMIGD1Q6UXZ0 262 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SPATA24Q86W54 205 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 IFNEQ86WN2 208 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 OOSP2Q86WS3 158 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SLC15A3Q8IY34 581 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.41□□□□□ -0.9
TPM3-210ENST00000368530 LAS2Q8IYD9 372 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 GLB1L3Q8NCI6 653 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 OR2L8Q8NGY9 312 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 JADE3Q92613 823 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PNPLA2Q96AD5 504 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 TMEM125Q96AQ2 219 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 PRAP1Q96NZ9 151 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 OR52E6Q96RD3 313 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 BARD1Q99728 777 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 PELI2Q9HAT8 420 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 BRF2Q9HAW0 419 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 S100A14Q9HCY8 104 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 C1GALT1Q9NS00 363 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 CD300AQ9UGN4 299 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ERRFI1Q9UJM3 462 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 RUVBL1Q9Y265 456 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 HEBP2Q9Y5Z4 205 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 NUP214P35658 2090 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 MDC1Q14676 2089 aaKnown RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 DYTNA2CJ06 578 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 NPIPB8E9PQR5 432 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 BTN3A3O00478 584 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 ACOT8O14734 319 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 DPM1O60762 260 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 FKBP6O75344 327 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 BCAS2O75934 225 aaPredicted RBP9.41□□□□□ -0.9
TPM3-210ENST00000368530 LDLRP01130 860 aa9.41□□□□□ -0.9
TPM3-210ENST00000368530 STATHP02808 62 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms