RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 S100A3P33764 101 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CASP9P55211 416 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF284Q2VY69 593 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MGAT5BQ3V5L5 792 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 HSD17B14Q9BPX1 270 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SYT3Q9BQG1 590 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SLC25A51Q9H1U9 297 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MAGEH1Q9H213 219 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MFSD1Q9H3U5 465 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MYOCOSA0A1B0GUC4 107 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MROH6A6NGR9 719 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 A6NIZ1 184 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SOCS5O75159 536 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CLLU1Q5K131 121 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CTSL3PQ5NE16 218 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 XKR5Q6UX68 686 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF704Q6ZNC4 412 aaPredicted RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 GHDCQ8N2G8 530 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SPON2Q9BUD6 331 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 EPHX3Q9H6B9 360 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 IL17RBQ9NRM6 502 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 HCCSP53701 268 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 RHOAP61586 193 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SHC2P98077 582 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF540Q8NDQ6 660 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 OR51F2Q8NH61 342 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF417Q8TAU3 575 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM163Q8TC26 289 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 STK35Q8TDR2 534 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 C10orf82Q8WW14 230 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CDHR5Q9HBB8 845 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SLC17A3O00476 420 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 FFAR3O14843 346 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MID1O15344 667 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 BUD23O43709 281 aaKnown RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SUPT20HL2P0C7V6 817 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ARP10275 920 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ANTXR2P58335 489 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 VLDLRP98155 873 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 GPR149Q86SP6 731 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ACTL8Q9H568 366 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 RDH14Q9HBH5 336 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 THSD1Q9NS62 852 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 LRIT2A6NDA9 550 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MC3RP41968 323 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 FAM74A3Q4VXF1 159 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 COMMD6Q7Z4G1 85 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZFPM2Q8WW38 1151 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 C1orf74Q96LT6 269 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 TBL1XR1Q9BZK7 514 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 OR52A5Q9H2C5 316 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 TCEAL2Q9H3H9 227 aaPredicted RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 RASL12Q9NYN1 266 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 LSM7Q9UK45 103 aaKnown RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 TRAV9-1A0A075B6T8 112 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 F8VP50 259 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 K7ERU9 68 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 F2P00734 622 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 FGF9P31371 208 aaPredicted RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 IL13RA1P78552 427 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 POU6F1Q14863 301 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 NCMAPQ5T1S8 102 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 GPR22Q99680 433 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CHURC1-FNTBB4DL54 471 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF749O43361 778 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 GHRHP01286 108 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 PTAFRP25105 342 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 HTR3AP46098 478 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MAP2K3P46734 347 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MAN2A2P49641 1150 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CCR9P51686 369 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 FAPQ12884 760 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 IQCJQ1A5X6 159 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 PCDH20Q8N6Y1 951 aaKnown RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 FAM156AQ8NDB6 213 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 COQ8BQ96D53 544 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 RTL8AQ9BWD3 113 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 POPDC2Q9HBU9 364 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 RANGRFQ9HD47 186 aaPredicted RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 DCDC2CA8MYV0 355 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MFSD11O43934 449 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ALDH1A1P00352 501 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 EPHX2P34913 555 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SLC10A7Q0GE19 358 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 NFATC3Q12968 1075 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 MELKQ14680 651 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 TMEM65Q6PI78 240 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 PINX1Q96BK5 328 aaKnown RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 LRFN3Q9BTN0 628 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CDADC1Q9BWV3 514 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 CHST7Q9NS84 486 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ERCC6L2Q5T890 1561 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 SSTR1P30872 391 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ENTPD1P49961 510 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF836Q6ZNA1 936 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 TRMT11Q7Z4G4 463 aaKnown RBP3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF561Q8N587 486 aa3.61□□□□□ -1.83
SYNE1-207ENST00000367255 ZNF485Q8NCK3 441 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms