RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ATP6AP2A0A1C7CYW4 349 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZSCAN5CA6NGD5 496 aaPredicted RBP3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 ATP9AO75110 1047 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 RHBDL1O75783 438 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 LY6G6DO95868 133 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 SCG2P13521 617 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 CASTP20810 708 aaKnown RBP3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 GPX3P22352 226 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 FASP25445 335 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 MTIF2P46199 727 aaKnown RBP3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 RPL34P49207 117 aaKnown RBP3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 PPIAP62937 165 aaKnown RBP3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 IGLV3-21P80748 117 aaPredicted RBP3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 SPHARQ15513 63 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 NHSL2Q5HYW2 709 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 SNRNP48Q6IEG0 339 aaKnown RBP3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 NHLRC1Q6VVB1 395 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZNF600Q6ZNG1 722 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 SLC22A18ASQ8N1D0 253 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 NME8Q8N427 588 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 ZNF671Q8TAW3 534 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 PRCCQ92733 491 aaPredicted RBP3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 FAM162AQ96A26 154 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 ESAMQ96AP7 390 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 PPP1R16AQ96I34 528 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 TEX13BQ9BXU2 312 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 IL1RL2Q9HB29 575 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 TAS2R16Q9NYV7 291 aa3.28□□□□□ -1.88
RNU4-28P-201ENST00000364739 COL16A1Q07092 1604 aaPredicted RBP3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 SH3PXD2BA1X283 911 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 CCT8L1PA6NM43 557 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 CHUKO15111 745 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 ANXA9O76027 345 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 FOSL2P15408 326 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 GLRA1P23415 457 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 LYZP61626 148 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 WSCD2Q2TBF2 565 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 CCDC158Q5M9N0 1113 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 UTF1Q5T230 341 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 LIPJQ5W064 366 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 WDR25Q64LD2 544 aaPredicted RBP3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 PAMR1Q6UXH9 720 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 ASPGQ86U10 573 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 TUSC5Q8IXB3 177 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 THEM5Q8N1Q8 247 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 RELL2Q8NC24 303 aaPredicted RBP3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 CHDHQ8NE62 594 aaPredicted RBP3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 TRPV3Q8NET8 790 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 OR1K1Q8NGR3 316 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 RAB40CQ96S21 281 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 ZBP1Q9H171 429 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 VPS18Q9P253 973 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 GTF3C4Q9UKN8 822 aa3.27□□□□□ -1.89
RNU4-28P-201ENST00000364739 MCF2LO15068 1137 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 KIAA0513O60268 411 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 TSC22D2O75157 780 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 RAD51DO75771 328 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 SUPT20HL2P0C7V6 817 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 B4GALT1P15291 398 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 SLC34A1Q06495 639 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 EMC2Q15006 297 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 ACKR1Q16570 336 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 CGB2Q6NT52 195 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 KLHDC8AQ8IYD2 350 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 AFAP1L1Q8TED9 768 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 TCP11Q8WWU5 503 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 ZBED6CLQ96FA7 236 aaPredicted RBP3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 C16orf58Q96GQ5 468 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 CDKN2AIPNLQ96HQ2 116 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 LRRC2Q9BYS8 371 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 TMEM206Q9H813 350 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 TUFT1Q9NNX1 390 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 IL17CQ9P0M4 197 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 RNF24Q9Y225 148 aa3.26□□□□□ -1.89
RNU4-28P-201ENST00000364739 OOEPA6NGQ2 149 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 K7ERI5 159 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 GH1P01241 217 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 PRG2P13727 222 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 ZBTB25P24278 435 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 CCR4P51679 360 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 GSTO1P78417 241 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 MFGE8Q08431 387 aaPredicted RBP3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 ZNF79Q15937 498 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 UNC50Q53HI1 259 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 GBP6Q6ZN66 633 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 MSANTD1Q6ZTZ1 278 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 CYP4V2Q6ZWL3 525 aaPredicted RBP3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 GALNTL5Q7Z4T8 443 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 HOOK3Q86VS8 718 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 ZNF444Q8N0Y2 327 aaPredicted RBP3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 FBXW8Q8N3Y1 598 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 OR4F5Q8NH21 305 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 GANCQ8TET4 914 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 PNPLA2Q96AD5 504 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 SSX3Q99909 188 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 TMEM161AQ9NX61 479 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 EIF3KQ9UBQ5 218 aaKnown RBP3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 FBXL5Q9UKA1 691 aa3.25□□□□□ -1.89
RNU4-28P-201ENST00000364739 IKZF3Q9UKT9 509 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms