RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 USP10Q14694 798 aaKnown RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 SEC23BQ15437 767 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 TBCEQ15813 527 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZNF284Q2VY69 593 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 OTUD1Q5VV17 481 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLC26A9Q7LBE3 791 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 KRT74Q7RTS7 529 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 TRMT11Q7Z4G4 463 aaKnown RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 SLC44A2Q8IWA5 706 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 ENTHD1Q8IYW4 607 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 SETD9Q8NE22 299 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 FBXO30Q8TB52 745 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 WDR20Q8TBZ3 569 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 PHOSPHO1Q8TCT1 267 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 ASZ1Q8WWH4 475 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 PEX11GQ96HA9 241 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 TFB2MQ9H5Q4 396 aaKnown RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 EVA1AQ9H8M9 152 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 AKTIPQ9H8T0 292 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 ABCB9Q9NP78 766 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 PRMT8Q9NR22 394 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 VNN3Q9NY84 501 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 MID2Q9UJV3 735 aa8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 ZFP37Q9Y6Q3 630 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-202ENST00000358207 UBA6A0AVT1 1052 aaPredicted RBP8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 QSOX1O00391 747 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 GNGT2O14610 69 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 DHFRP00374 187 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 APOA4P06727 396 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 SYPP08247 313 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 CNPP09543 421 aaKnown RBP8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 HLA-EP13747 358 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 MUC1P15941 1255 aaPredicted RBP8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 EEFSECP57772 596 aaKnown RBP8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 ACTR1AP61163 376 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 EFEMP1Q12805 493 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 ACER2Q5QJU3 275 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 KIAA1614Q5VZ46 1190 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 RHOUQ7L0Q8 258 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 RAB11FIP2Q7L804 512 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 MILR1Q7Z6M3 343 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 CUZD1Q86UP6 607 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 TAC4Q86UU9 113 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 PROSER1Q86XN7 944 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 FAM217AQ8IXS0 508 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZFP82Q8N141 532 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 TMEM86AQ8N2M4 240 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 SVOPLQ8N434 492 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 BMPERQ8N8U9 685 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 FCGR1BQ92637 280 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 MRPS24Q96EL2 167 aaKnown RBP8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 TEX37Q96LM6 180 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 ACBD6Q9BR61 282 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 TKTL2Q9H0I9 626 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 POMKQ9H5K3 350 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 UFSP2Q9NUQ7 469 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 MED9Q9NWA0 146 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 CLDND1Q9NY35 253 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 MPP6Q9NZW5 540 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 ZNF222Q9UK12 451 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 PPIEQ9UNP9 301 aaKnown RBP8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 DENND4CQ5VZ89 1909 aa8.9□□□□□ -0.99
SMARCAL1-202ENST00000358207 FAM240BA0A1B0GVZ2 78 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 LOC390937A0A1W2PQ73 354 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 BCLAF3A2AJT9 711 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 TUBAL3A6NHL2 446 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 PRSS47A8MTI9 375 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 INMT-MINDY4F8WBC2 141 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 M0R296 226 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 UBFD1O14562 309 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC35E2BP0CK96 405 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CBR1P16152 277 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 LHCGRP22888 699 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 HOXA9P31269 272 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 FOXM1Q08050 763 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CAMK2DQ13557 499 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 EXOC3L2Q2M3D2 409 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 USP39Q53GS9 565 aaKnown RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 TMEM88Q6PEY1 159 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ATCAYQ86WG3 371 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CIR1Q86X95 450 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 PGBD3Q8N328 593 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 CDYL2Q8N8U2 506 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 RHBDF1Q96CC6 855 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 C11orf24Q96F05 449 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 ANKRD19PQ9H560 264 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 GLOD4Q9HC38 313 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 TAS2R16Q9NYV7 291 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 UBP1Q9NZI7 540 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 EPHA6Q9UF33 1036 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 BTNL2Q9UIR0 455 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 TEX13CA0A0J9YWL9 993 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 FABP12A6NFH5 140 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 HHLA1C9JL84 531 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 LALBAP00709 142 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 XKP51811 444 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 DLX2Q07687 328 aaPredicted RBP8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 SLC3A1Q07837 685 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 SNAPC1Q16533 368 aa8.89□□□□□ -0.99
SMARCAL1-202ENST00000358207 PFKFB4Q16877 469 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms