RNA–Protein interactions for RNA: ENST00000357985.6

FAM3B-201, Transcript of family with sequence similarity 3 member B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FAM3B, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-201ENST00000357985 ETHE1O95571 254 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 GLI4P10075 376 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 PCNAP12004 261 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 GP5P40197 560 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 PEX19P40855 299 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 RAP1GDS1P52306 607 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 KCNJ2P63252 427 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 TNFRSF17Q02223 184 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 FOXO1Q12778 655 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 ASPHQ12797 758 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 E2F2Q14209 437 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 SLC10A1Q14973 349 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 OR4D1Q15615 310 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 ZKSCAN8Q15776 578 aaPredicted RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 MED27Q6P2C8 311 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 CHSY3Q70JA7 882 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 WDR53Q7Z5U6 358 aaPredicted RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 SPATA6LQ8N4H0 392 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 ZNF473Q8WTR7 871 aaKnown RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 PYROXD1Q8WU10 500 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 NINJ1Q92982 152 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 SPACA9Q96E40 222 aaPredicted RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 CMTM7Q96FZ5 175 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 PELOQ9BRX2 385 aaKnown RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 SMYD2Q9NRG4 433 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 MS4A12Q9NXJ0 267 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 Q9UFV3 132 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 PHF11Q9UIL8 331 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 PTBP2Q9UKA9 531 aaKnown RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 MTO1Q9Y2Z2 717 aaKnown RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 L3MBTL1Q9Y468 752 aa12.34□□□□□ -0.43
FAM3B-201ENST00000357985 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.34□□□□□ -0.43
FAM3B-201ENST00000357985 NINQ8N4C6 2090 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 FGF17O60258 216 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 ZNF354AO60765 605 aaPredicted RBP12.33□□□□□ -0.44
FAM3B-201ENST00000357985 KRT38O76015 456 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 CELA3AP09093 270 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 DNAJA1P31689 397 aaKnown RBP12.33□□□□□ -0.44
FAM3B-201ENST00000357985 CASP2P42575 452 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 RPL21P46778 160 aaKnown RBP12.33□□□□□ -0.44
FAM3B-201ENST00000357985 RAB10P61026 200 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 PHEXP78562 749 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 BIKQ13323 160 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 PIGGQ5H8A4 983 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 RIPPLY2Q5TAB7 128 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 KHDRBS2Q5VWX1 349 aaKnown RBP12.33□□□□□ -0.44
FAM3B-201ENST00000357985 SLC22A10Q63ZE4 541 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 RTL6Q6ICC9 239 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 SLC29A4Q7RTT9 530 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 UBE3DQ7Z6J8 389 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 C9orf40Q8IXQ3 194 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 LAS2Q8IYD9 372 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 FBXW8Q8N3Y1 598 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 LIX1Q8N485 282 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 SLC15A4Q8N697 577 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 PAQR8Q8TEZ7 354 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 UBTD2Q8WUN7 234 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 ANKRD9Q96BM1 317 aaPredicted RBP12.33□□□□□ -0.44
FAM3B-201ENST00000357985 LRRC46Q96FV0 321 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 FBXL20Q96IG2 436 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 GAL3ST4Q96RP7 486 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 CD244Q9BZW8 370 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 RPF2Q9H7B2 306 aaKnown RBP12.33□□□□□ -0.44
FAM3B-201ENST00000357985 TRMT1Q9NXH9 659 aaKnown RBP12.33□□□□□ -0.44
FAM3B-201ENST00000357985 QPCTLQ9NXS2 382 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 DNAJB12Q9NXW2 375 aaKnown RBP12.33□□□□□ -0.44
FAM3B-201ENST00000357985 OPTCQ9UBM4 332 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 ADGRE2Q9UHX3 823 aa12.33□□□□□ -0.44
FAM3B-201ENST00000357985 SUPT3HB4E1H0 165 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 K7EPI3 171 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 TP73O15350 636 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 EIF3HO15372 352 aaKnown RBP eCLIP12.32□□□□□ -0.44
FAM3B-201ENST00000357985 SH3BGRLO75368 114 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 SUPT3HO75486 399 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 PIAS1O75925 651 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 NADKO95544 446 aaPredicted RBP12.32□□□□□ -0.44
FAM3B-201ENST00000357985 TGFB1P01137 390 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 IGKV3-11P04433 115 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 ALOX15P16050 662 aaPredicted RBP12.32□□□□□ -0.44
FAM3B-201ENST00000357985 EPORP19235 508 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 ENDOUP21128 410 aaKnown RBP12.32□□□□□ -0.44
FAM3B-201ENST00000357985 SSTR1P30872 391 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 TLX1P31314 330 aaPredicted RBP12.32□□□□□ -0.44
FAM3B-201ENST00000357985 PIGAP37287 484 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 BUD31P41223 144 aaPredicted RBP12.32□□□□□ -0.44
FAM3B-201ENST00000357985 PAFAH1B1P43034 410 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 CALCOCO2Q13137 446 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 CBLBQ13191 982 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 DDX39BQ13838 428 aaKnown RBP12.32□□□□□ -0.44
FAM3B-201ENST00000357985 SLMAPQ14BN4 828 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 ZNF791Q3KP31 576 aaPredicted RBP12.32□□□□□ -0.44
FAM3B-201ENST00000357985 KRTAP21-3Q3LHN1 58 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 PRAMEF20Q5VT98 475 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 GRHL2Q6ISB3 625 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 ARSKQ6UWY0 536 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 RNF111Q6ZNA4 994 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 CREG2Q8IUH2 290 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 FAM13CQ8NE31 585 aa12.32□□□□□ -0.44
FAM3B-201ENST00000357985 CHDHQ8NE62 594 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms