RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 EGFLAMQ63HQ2 1017 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 UEVLDQ8IX04 471 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 PAPD5Q8NDF8 572 aaKnown RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 PCDH19Q8TAB3 1148 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 SLC35B2Q8TB61 432 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CITED4Q96RK1 184 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CGREF1Q99674 301 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 FUZQ9BT04 418 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ITPAQ9BY32 194 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 RBCK1Q9BYM8 510 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 LRRN3Q9H3W5 708 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 POPDC3Q9HBV1 291 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CD320Q9NPF0 282 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 FAM86C1Q9NVL1 165 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 SEC14L4Q9UDX3 406 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 NUFIP1Q9UHK0 495 aaKnown RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CLEC4EQ9ULY5 219 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 TIMM8BQ9Y5J9 83 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 AQP12BA6NM10 295 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CSTAP01040 98 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 EBLN1P0CF75 366 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 NUDT1P36639 197 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 RPP30P78346 268 aaKnown RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 BCL2L15Q5TBC7 163 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 NCBP2-AS2Q69YL0 99 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 NCEH1Q6PIU2 408 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 AQP12AQ8IXF9 295 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 HSPBAP1Q96EW2 488 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 IRF2BPLQ9H1B7 796 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF442Q9H7R0 627 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 MEAF6Q9HAF1 191 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF226Q9NYT6 803 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 GPR160Q9UJ42 338 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 A0A1W2PP55 124 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 C11orf98E9PRG8 122 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 DLX3O60479 287 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 OPN1SWP03999 348 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 KCNE1P15382 129 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 APLNRP35414 380 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ETV3P41162 512 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 MVKQ03426 396 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF423Q2M1K9 1284 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 GPRC6AQ5T6X5 926 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CLEC1AQ8NC01 280 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 URM1Q9BTM9 101 aaKnown RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 GATA5Q9BWX5 397 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ACTR6Q9GZN1 396 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 PLEKHA3Q9HB20 300 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 B4GALT6Q9UBX8 382 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 SCML1Q9UN30 329 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 WDR45Q9Y484 360 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM221A6NGB7 291 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ANKRD66B4E2M5 251 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 RTCAO00442 366 aaKnown RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 MPC1LP0DKB6 136 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 MSX2P35548 267 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 OGDHQ02218 1023 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 DSC3Q14574 896 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM214Q6NUQ4 689 aaKnown RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 PSD4Q8NDX1 1056 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 MFSD8Q8NHS3 518 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 DIO2Q92813 273 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 BADQ92934 168 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CNN2Q99439 309 aaKnown RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF559Q9BR84 538 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 PIGVQ9NUD9 493 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 GSKIPQ9P0R6 139 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 TMEM14AQ9Y6G1 99 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 C1orf226A1L170 272 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 EFCAB7A8K855 629 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 EDNRBP24530 442 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 HMGCS1Q01581 520 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ADGRE1Q14246 886 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 GRM7Q14831 915 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 VMACQ2NL98 169 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 NAPRTQ6XQN6 538 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ZDHHC14Q8IZN3 488 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 UBXN10Q96LJ8 280 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 TRIB3Q96RU7 358 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 TSSK6Q9BXA6 273 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 A8MT66 165 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 EMC8O43402 210 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ZNF821O75541 412 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CFHP08603 1231 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 NDUFV2P19404 249 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ACVRL1P37023 503 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 TAS2R39P59534 338 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ACTA2P62736 377 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ACTG2P63267 376 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ELAVL3Q14576 367 aaKnown RBP5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ESCO2Q56NI9 601 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 SH3D19Q5HYK7 790 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 SYPL2Q5VXT5 272 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 UBE2Q1Q7Z7E8 422 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 GOLM1Q8NBJ4 401 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 OR9K2Q8NGE7 335 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CD300LFQ8TDQ1 290 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 THAP4Q8WY91 577 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 ESAMQ96AP7 390 aa5.32□□□□□ -1.56
PTPRD-202ENST00000356435 CDKN2AIPNLQ96HQ2 116 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms